BLASTX nr result

ID: Coptis23_contig00000316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000316
         (1874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265097.1| PREDICTED: WPP domain-interacting protein 2-...   202   3e-49
emb|CAN74053.1| hypothetical protein VITISV_005346 [Vitis vinifera]   198   5e-48
ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-43
emb|CBI39858.3| unnamed protein product [Vitis vinifera]              180   1e-42
ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|2...   177   7e-42

>ref|XP_002265097.1| PREDICTED: WPP domain-interacting protein 2-like [Vitis vinifera]
          Length = 614

 Score =  202 bits (513), Expect = 3e-49
 Identities = 139/361 (38%), Positives = 205/361 (56%), Gaps = 27/361 (7%)
 Frame = +1

Query: 733  RAKTETAKKPRGGGVKAVDNDASYSSVESDLRSSNALFAD-----ISNGKQ----INFDM 885
            + +TET+KKPRG  VK ++ + S+SS+ESD RSSN +F        SNGKQ     N+D 
Sbjct: 244  KPRTETSKKPRGERVK-IEKENSHSSMESDSRSSNFVFMQGNFSANSNGKQSGTLTNYDG 302

Query: 886  DNNSEAQASDQHSNEYPLGRNYSIDNGXXXXXXXXXSQGYDAGGVSWEPNEEQSENQRRP 1065
            +N+ EAQA ++   E  L   YS +               D   + WE  EE+ E  + P
Sbjct: 303  ENSDEAQAGEKQFGE-ELQTGYSKETVGEVEDLSLDDLAAD---LPWEVKEEKGETDQ-P 357

Query: 1066 STSQHLLADSIVSLQAVHEALEKEIKIFAEIGKEPVVLLDDPTHYFFSDPKFQSVVPEVH 1245
               Q  L DSI++LQ+V EALE+E++ F EI KEP+ + +       S   F S+ PE+H
Sbjct: 358  LIDQDPLVDSILALQSVQEALEREVQKFGEIAKEPISVCNSSIKDS-SSADFASMGPEIH 416

Query: 1246 GTNSSGQVHFDEIEKSCSMPLEAELIKTQSKVYILEGKLEEALSILEIKESRVVELEGIL 1425
              +SS Q+  +E  +S S  +E ++   +  +  LE KLEEA ++L++KE R+VELE   
Sbjct: 417  EASSSCQLSSEETRQSDSCFMETQMHSLKQNISSLESKLEEATAMLKVKEYRIVELE--- 473

Query: 1426 NETELPKGEPQSSLLSLQERCAEIESELEDLFQKKIEAEVECLAVRKTSQKLKVASEDQI 1605
                    E  S++   Q++C E+E+ELEDLF++KIEAEVE L + +T QKL+    DQI
Sbjct: 474  --------ESGSAIELQQKQCREMETELEDLFKQKIEAEVEYLTLTRTIQKLRAG--DQI 523

Query: 1606 ALFEEQKSLLGQQNKILHKLAS------------------FGESLDTEEVLKMHKRICRH 1731
             ++EEQK+L G+Q ++L+KL                     G+ L +EEV+KM KR+C+ 
Sbjct: 524  MIYEEQKALAGEQAQMLNKLGEAEGKAAMLKKQAEKLETYCGDILGSEEVMKMEKRLCKV 583

Query: 1732 T 1734
            T
Sbjct: 584  T 584


>emb|CAN74053.1| hypothetical protein VITISV_005346 [Vitis vinifera]
          Length = 597

 Score =  198 bits (503), Expect = 5e-48
 Identities = 138/360 (38%), Positives = 206/360 (57%), Gaps = 28/360 (7%)
 Frame = +1

Query: 733  RAKTETAKKPRGGGVKAVDNDASYSSVESDLRSSNALFAD-----ISNGKQ----INFDM 885
            + +TET+KKPRG  VK ++ + S+SS+ESD RSSN +F        SNGKQ     N+D 
Sbjct: 244  KPRTETSKKPRGERVK-IEKENSHSSMESDSRSSNFVFMQGNFSANSNGKQSGTLTNYDG 302

Query: 886  DNNSEAQASDQHSNEYPLGRNYSIDNGXXXXXXXXXSQGYDAGGVSWEPNEEQSENQRRP 1065
            +N+ EAQ S +   E     + S+D+               A  + WE  EE+ E  + P
Sbjct: 303  ENSDEAQGSKETVGEV---EDLSLDDL--------------AADLPWEVKEEKGETDQ-P 344

Query: 1066 STSQHLLADSIVSLQAVHEALEKEIKIFAEI-GKEPVVLLDDPTHYFFSDPKFQSVVPEV 1242
               Q  L DSI++LQ+V EALE+E++ F EI  KEP+ + +       S   F S+ PE+
Sbjct: 345  LIDQDSLVDSILALQSVQEALEREVQKFGEIIAKEPISVCNSSIKDS-SSADFASMGPEI 403

Query: 1243 HGTNSSGQVHFDEIEKSCSMPLEAELIKTQSKVYILEGKLEEALSILEIKESRVVELEGI 1422
            H  +SS Q+  +E  +S S  +E ++   +  +  LE KLEEA+++L++KESR+VELE  
Sbjct: 404  HEASSSCQLSSEETRQSDSCFMETQMHSLKQNISSLESKLEEAMAMLKVKESRIVELE-- 461

Query: 1423 LNETELPKGEPQSSLLSLQERCAEIESELEDLFQKKIEAEVECLAVRKTSQKLKVASEDQ 1602
                     E  S++   Q++C E+E+ELEDLF++KIEAEVE L + +T QKL+    DQ
Sbjct: 462  ---------ESGSAIELQQKQCREMETELEDLFKQKIEAEVEYLTLTRTIQKLRAG--DQ 510

Query: 1603 IALFEEQKSLLGQQNKILHKLAS------------------FGESLDTEEVLKMHKRICR 1728
            I ++EEQK+L G+Q ++L+KL                     G+ L +EEV+KM KR+C+
Sbjct: 511  IMIYEEQKALAGEQAQMLNKLGEAEGKAAMLKKQAEKLETYCGDILGSEEVMKMEKRLCK 570


>ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|222872093|gb|EEF09224.1|
            predicted protein [Populus trichocarpa]
          Length = 643

 Score =  183 bits (465), Expect = 1e-43
 Identities = 135/355 (38%), Positives = 194/355 (54%), Gaps = 27/355 (7%)
 Frame = +1

Query: 745  ETAKKPRGGGVKAVDNDASYSSVESDLRSSNALFAD-----ISNGKQ----INFDMDNNS 897
            E +KKPRG  VK ++ + S+SS+ESD RSSN +F        SNGKQ    +N+D +N+ 
Sbjct: 276  ENSKKPRGERVK-IEKENSHSSMESDSRSSNFVFVQGDFSVTSNGKQSGRSMNYDGENSD 334

Query: 898  EAQASDQHSNEYPLGRNYSIDNGXXXXXXXXXSQGYDAGGVSWEPNEEQSENQRRPSTSQ 1077
            EA A +Q  +   +  +Y  +N          S+   A   SW    E+S+N + PS  Q
Sbjct: 335  EAHAVEQQFSG-GVHTSYGQEN---VGEVEDLSENELAAEASWTDKGEKSDNHQ-PSADQ 389

Query: 1078 HLLADSIVSLQAVHEALEKEIKIFAEIGKEPVVLLDDPTHYFFSDPKFQSVVPEVHGTNS 1257
                +SI+SLQ+V +ALE E+K   EIGK   V+ D             S  PE+  ++ 
Sbjct: 390  DPFVESILSLQSVQKALENEVKKLGEIGKVSSVVEDS-----------SSANPEIQKSSL 438

Query: 1258 SGQVHFDEIEKSCSMPLEAELIKTQSKVYILEGKLEEALSILEIKESRVVELEGILNETE 1437
              Q   + I++S S  LE  ++     V  LE +LEEA +++++KE RV ELE  LN   
Sbjct: 439  PNQFDSESIKESNS--LEFRVLSLTQTVQYLESRLEEAKAMIKVKELRVAELEATLNGDR 496

Query: 1438 LPKGEPQSSLLSLQERCAEIESELEDLFQKKIEAEVECLAVRKTSQKLKVASEDQIALFE 1617
             PK E  S+    QE+  EIE+ELE LF++KIEAE+E LA+  + QKL VA+ DQI LFE
Sbjct: 497  SPKEESASTTELQQEKYREIENELEGLFKQKIEAEIEHLAL-ASLQKLGVAAGDQITLFE 555

Query: 1618 EQKSLLGQQNKILHKLAS------------------FGESLDTEEVLKMHKRICR 1728
            EQ++L G+Q ++L+KL                     G+ L TEEV KM  ++C+
Sbjct: 556  EQEALAGEQVQMLNKLGEAGNKAASLKKQAEELEKYCGDVLGTEEVFKMQNKVCK 610


>emb|CBI39858.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  180 bits (457), Expect = 1e-42
 Identities = 154/498 (30%), Positives = 230/498 (46%), Gaps = 43/498 (8%)
 Frame = +1

Query: 370  PQRKGFGLKKWKRIRR----DLSAS-------------TTNNQTPPTATDDARGDPTDVV 498
            P  KG+GLKKW+RIRR    D S S             + N   PP  ++  +     V 
Sbjct: 49   PTTKGYGLKKWRRIRRDFVKDSSVSVDSSKMLKRGLSGSLNPAKPPYLSEIKQNSEGSVG 108

Query: 499  SKML--------KXXXXXXXXXXXXFPVNSTDSMDNENNNSGDIXXXXXXXXXXXPTQPL 654
            S  +                     F V ST +   ++ NS D                 
Sbjct: 109  SANILVKNSGVNDHLAAHASSSDSRFAVGSTFTAGTDSENSEDR---------------- 152

Query: 655  QFTTPSKIFXXXXXXXXXXXXXXXXVRAKTETAKKPRGGGVKAVDNDASYSSVESDLRSS 834
              ++ S                    + +TET+KKPRG  VK ++ + S+SS+ESD RSS
Sbjct: 153  --SSKSSTAASAPKARHDMNARVQQGKPRTETSKKPRGERVK-IEKENSHSSMESDSRSS 209

Query: 835  NALFADISNGKQINFDMDNNSEAQASDQHSNEYPLGRNYSIDNGXXXXXXXXXSQGYDAG 1014
            N +F       Q NF  ++N +   +                              YD  
Sbjct: 210  NFVFM------QGNFSANSNGKQSGT---------------------------LTNYDG- 235

Query: 1015 GVSWEPNEEQSENQRRPSTSQHLLADSIVSLQAVHEALEKEIKIFAEIGKEPVVLLDDPT 1194
                  N+E+ E  + P   Q  L DSI++LQ+V EALE+E++ F EI KEP+ + +   
Sbjct: 236  -----ENKEKGETDQ-PLIDQDPLVDSILALQSVQEALEREVQKFGEIAKEPISVCNSSI 289

Query: 1195 HYFFSDPKFQSVVPEVHGTNSSGQVHFDEIEKSCSMPLEAELIKTQSKVYILEGKLEEAL 1374
                S   F S+ PE+H  +SS Q+  +E  +S S  +E ++   +  +  LE KLEEA 
Sbjct: 290  KDS-SSADFASMGPEIHEASSSCQLSSEETRQSDSCFMETQMHSLKQNISSLESKLEEAT 348

Query: 1375 SILEIKESRVVELEGILNETELPKGEPQSSLLSLQERCAEIESELEDLFQKKIEAEVECL 1554
            ++L++KE R+VELE           E  S++   Q++C E+E+ELEDLF++KIEAEVE L
Sbjct: 349  AMLKVKEYRIVELE-----------ESGSAIELQQKQCREMETELEDLFKQKIEAEVEYL 397

Query: 1555 AVRKTSQKLKVASEDQIALFEEQKSLLGQQNKILHKLAS------------------FGE 1680
             + +T QKL+    DQI ++EEQK+L G+Q ++L+KL                     G+
Sbjct: 398  TLTRTIQKLRAG--DQIMIYEEQKALAGEQAQMLNKLGEAEGKAAMLKKQAEKLETYCGD 455

Query: 1681 SLDTEEVLKMHKRICRHT 1734
             L +EEV+KM KR+C+ T
Sbjct: 456  ILGSEEVMKMEKRLCKVT 473


>ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|222847847|gb|EEE85394.1|
            predicted protein [Populus trichocarpa]
          Length = 549

 Score =  177 bits (450), Expect = 7e-42
 Identities = 131/356 (36%), Positives = 191/356 (53%), Gaps = 28/356 (7%)
 Frame = +1

Query: 745  ETAKKPRGGGVKAVDNDASYSSVESDLRSSNALFAD-----ISNGKQ----INFDMDNNS 897
            E  KKPRG  VK ++ + S+SS+ESD RSSN +F        SNGKQ    + +D +N+ 
Sbjct: 203  ENGKKPRGERVK-IEKENSHSSMESDSRSSNFVFMQGDCSVTSNGKQGGRSMIYDGENSD 261

Query: 898  EAQASDQH-SNEYPLGRNYSIDNGXXXXXXXXXSQGYDAGGVSWEPNEEQSENQRRPSTS 1074
            EA A +Q  S E   G  Y  +N          S+   A   SW    E+  + R PS  
Sbjct: 262  EAHAGEQQFSGEVHTG--YGQEN---VGEVEDVSEDELAAEASWTDKGEKRVDHR-PSAD 315

Query: 1075 QHLLADSIVSLQAVHEALEKEIKIFAEIGKEPVVLLDDPTHYFFSDPKFQSVVPEVHGTN 1254
            Q    +SI+SLQ+V +ALE E++   EIGK   V+ D                PE+H ++
Sbjct: 316  QDQWVESILSLQSVQKALENEVQKLGEIGKVSSVVEDSSL-----------ADPEIHESS 364

Query: 1255 SSGQVHFDEIEKSCSMPLEAELIKTQSKVYILEGKLEEALSILEIKESRVVELEGILNET 1434
             S +   +  ++S S  LE +++     V  LE  LE   ++L++KE+ V ELE  LN  
Sbjct: 365  LSDKFDSESFKESSS--LEFQVLSLTQNVKYLESSLELTKAMLKMKETVVAELEASLNGD 422

Query: 1435 ELPKGEPQSSLLSLQERCAEIESELEDLFQKKIEAEVECLAVRKTSQKLKVASEDQIALF 1614
            + PK E  S+    QE+  EIE+ELE LF++KIEAE++CLA+ +  QKL++A+ DQI LF
Sbjct: 423  KSPKEESASTAELQQEKSREIENELEGLFKQKIEAEIKCLALTRNLQKLRLAAGDQITLF 482

Query: 1615 EEQKSLLGQQNKILHKLAS------------------FGESLDTEEVLKMHKRICR 1728
            EEQ++L G+Q ++L+KL                     G+ L TEEV KM  ++C+
Sbjct: 483  EEQQALAGEQVQMLNKLGEAEIKAASLKKQAEQLEKYCGDVLGTEEVFKMQSKVCK 538


Top