BLASTX nr result

ID: Coptis23_contig00000314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000314
         (1782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_002525300.1| conserved hypothetical protein [Ricinus comm...   369   1e-99
ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813...   332   2e-88
ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780...   329   1e-87
ref|XP_003611548.1| BSD domain containing protein [Medicago trun...   329   2e-87

>ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|222860780|gb|EEE98322.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  372 bits (956), Expect = e-100
 Identities = 228/489 (46%), Positives = 288/489 (58%), Gaps = 20/489 (4%)
 Frame = +1

Query: 187  SSNPQNKKD-GDIETSSSSDDLNRGVKEDLSELTKTLTRQLWGVASFLAPPPPPVSDWNK 363
            + N  N KD  + E+        RGVKEDL++L KTLTRQLWGVASFLAPPP P    N+
Sbjct: 35   TDNVNNNKDLSNSESDQQQSATPRGVKEDLTDLKKTLTRQLWGVASFLAPPPEPPLTENR 94

Query: 364  WXXXXXXXXXXXXXXTARITGIRNDFAEIGGRFKNEISKLSSHKAVSEFSKIASTFLPFG 543
                            A I GIR+DFAEIGGRFK+ I+KLSS+K VSEF+KIAS  L  G
Sbjct: 95   SHTSDPDGSNDDDDDAALIAGIRSDFAEIGGRFKSGITKLSSNKTVSEFTKIASNLLQLG 154

Query: 544  NXXXXXXXXXXXXXXLVVGDAVGVTKEVLTFARNIAMHPETWXXXXXXXXXXXXXXXXXX 723
            +                   AVGVT+EV+ FAR++AMHPETW                  
Sbjct: 155  SESHEIG---------TTASAVGVTEEVVGFARDVAMHPETWLDFPLPDVQGFEDFDMSD 205

Query: 724  VQQEHALAVERLAPRLAALRIEICPGYMSEGCFWKIYFVLLHSRLNKHDAELLSTPQIVE 903
             QQEHALAVE LAPRLAALRIE+CPGYMSEGCFWKIYFVLLH RL+KHDAELLSTPQIVE
Sbjct: 206  AQQEHALAVEHLAPRLAALRIELCPGYMSEGCFWKIYFVLLHPRLSKHDAELLSTPQIVE 265

Query: 904  ARAMLTQDLQNRTRSHEL-SGRGTSFSKDSTNSPQEEHYSSLSDVPSENVSL-------- 1056
            ARAML+ +LQN+ ++       G   S    + P EE  S  S   SE+V +        
Sbjct: 266  ARAMLSHELQNKAKAKSTPDWSGVDTSNVKADLPHEESLSVPSRAKSESVPIMTSGIEAV 325

Query: 1057 ------KTFACEPSHFLATTNVETEKHPVVSTEMQIVDKSVVEEEPIVH-KNKDIPVNSS 1215
                  KT   E +    +   ETEKHPV ST+MQI+DKSVVEE  +   K++    +SS
Sbjct: 326  SPTLAAKTSDNEAAPSFVSVESETEKHPVESTQMQIIDKSVVEEGKVDQTKHQHSSSSSS 385

Query: 1216 SKFLDPNYEEDGDEWLEDENSEMMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSSKA 1395
            S  L+  +++DGD+WL+D++SEM+G  + +S+PLGN                  P S K 
Sbjct: 386  SGILEEKFDDDGDDWLKDDSSEMIG-VSGSSMPLGN--DEDVSFSDLEEDDGDEPASYKK 442

Query: 1396 VTVNS--SKKESRDWVQLEKSSSNSRRDLS-VGTGSIGSEQTHVNDRDGKDHDNKDCSEW 1566
            V   S  + K S+DWVQL +SS++S +D+  V   + GSE+        ++ +NK+ S+W
Sbjct: 443  VASGSDCATKGSQDWVQLSRSSADSVKDIKPVSIKNAGSEKV-----SARNSENKESSDW 497

Query: 1567 LSVDDIDVI 1593
            L VDDIDVI
Sbjct: 498  LDVDDIDVI 506


>ref|XP_002525300.1| conserved hypothetical protein [Ricinus communis]
            gi|223535458|gb|EEF37128.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 501

 Score =  369 bits (948), Expect = 1e-99
 Identities = 231/488 (47%), Positives = 284/488 (58%), Gaps = 19/488 (3%)
 Frame = +1

Query: 187  SSNPQNKKDGDIETSSSSDDLNRGVKEDLSELTKTLTRQLWGVASFLAPPPPPVSDWNKW 366
            +SNP         + SSS    RGVKEDLSELTKTLTRQ WGVASFLAPPPPP +  +  
Sbjct: 29   NSNPNATNSKSPPSPSSSATTPRGVKEDLSELTKTLTRQFWGVASFLAPPPPPDNQISDK 88

Query: 367  XXXXXXXXXXXXXXTARITGIRNDFAEIGGRFKNEISKLSSHKAVSEFSKIASTFLPFGN 546
                             I GIRNDFAEIGGRFK+ ISKLSS+  VSE +KIAS FL  G 
Sbjct: 89   SSDIQQSSDPESNDEDLIAGIRNDFAEIGGRFKSGISKLSSNVNVSEITKIASNFLQIGP 148

Query: 547  XXXXXXXXXXXXXXLVVGDAVGVTKEVLTFARNIAMHPETWXXXXXXXXXXXXXXXXXXV 726
                           ++G+AVGVT+EV+ FAR+IA HPETW                   
Sbjct: 149  ESDINDED-------LIGNAVGVTEEVVAFARDIATHPETWLDFPIPDDDVFYDFDMSDA 201

Query: 727  QQEHALAVERLAPRLAALRIEICPGYMSEGCFWKIYFVLLHSRLNKHDAELLSTPQIVEA 906
            QQEHALAVERL+PRLAALRIE+CPGYMSEGCFWKIYFVLLH RL+K DAELLSTPQ+VEA
Sbjct: 202  QQEHALAVERLSPRLAALRIELCPGYMSEGCFWKIYFVLLHPRLSKQDAELLSTPQVVEA 261

Query: 907  RAMLTQDLQNRTRSHE--LSGRGTSFSKDSTNSPQEEHYSSLSDVPSENVSLK------- 1059
            RAML+ +L NR +  +   S  G+S S  +   P EE  S  S   +E+  LK       
Sbjct: 262  RAMLSHELPNRAKPTKSGWSETGSSISTKTAGLPHEEPLSVPSRPETESAPLKTSSIEVI 321

Query: 1060 --TFAC-----EPSHFLATTNVETEKHPVVSTEMQIVDKSVVEEEPIVHKNKDIPVNSSS 1218
              TFA      E S  +    +ETEKH V STEM+I+DK+VVEEEP          +S+S
Sbjct: 322  SSTFAANAIGNEASPSVVADELETEKHLVQSTEMRIIDKAVVEEEPAYQAKHQYLSSSTS 381

Query: 1219 KFLDPNYEEDGDEWLEDENSEMMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSSKAV 1398
               D   E+DGD+WL +E+S M+G  +  +I + N                  P S K V
Sbjct: 382  NVPDEKSEDDGDDWLNEESSVMVGP-SGTTIHIEN--DEDVSFSDLEEDDGEVPVSYKKV 438

Query: 1399 TVNS--SKKESRDWVQLEKSSSNSRRDLS-VGTGSIGSEQTHVNDRDGKDHDNKDCSEWL 1569
            T  S  S K+ RDWVQL +SS+ S +D++ V    +GSEQ        ++ D+K+ ++WL
Sbjct: 439  TSGSDASSKDPRDWVQLSESSALSVKDINPVAVKHVGSEQV-----SARNSDSKESNDWL 493

Query: 1570 SVDDIDVI 1593
             VDDIDVI
Sbjct: 494  DVDDIDVI 501


>ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813259 [Glycine max]
          Length = 475

 Score =  332 bits (851), Expect = 2e-88
 Identities = 200/474 (42%), Positives = 273/474 (57%), Gaps = 7/474 (1%)
 Frame = +1

Query: 193  NPQNKKDGDI---ETSSSSDDLNRGVKEDLSELTKTLTRQLWGVASFLAPPPPPVSDWNK 363
            +P  K D +    +++S+ +   RGVKED SELTK+ +RQLWGVASFLAPPP P S+  K
Sbjct: 25   SPPKKPDSEPVQPDSASTPNPTTRGVKEDFSELTKSFSRQLWGVASFLAPPPDPQSE--K 82

Query: 364  WXXXXXXXXXXXXXXTARITGIRNDFAEIGGRFKNEISKLSSHKAVSEFSKIASTFLPFG 543
                              I GIRNDFAEI G+FK+ ISK+S +K VSEF+KIAS+FL  G
Sbjct: 83   PVADSNPNPTDDDEEEDIIAGIRNDFAEISGKFKSGISKISGNKTVSEFTKIASSFLQLG 142

Query: 544  NXXXXXXXXXXXXXXLVVGDAVGVTKEVLTFARNIAMHPETWXXXXXXXXXXXXXXXXXX 723
            +                +   +GVT++V+ FAR++A+HPETW                  
Sbjct: 143  SEEEYD-----------LEGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSDDFDLSD 191

Query: 724  VQQEHALAVERLAPRLAALRIEICPGYMSEGCFWKIYFVLLHSRLNKHDAELLSTPQIVE 903
             QQEHALAVE LAP LAALR+E+CPGYMS+G FWKIYFVL+H RL+K DA +LSTPQI+E
Sbjct: 192  AQQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIME 251

Query: 904  ARAMLTQDLQNRT---RSHELSGRGTSFSKDSTNSPQEEHYSSLSDVPSENVSLKTFACE 1074
            ARAMLT  L  R+   +  +LS  G   SK+     +E+H    S V  E+  L+T A E
Sbjct: 252  ARAMLTLALDKRSKEKKESDLSAGGNVPSKE-----EEQHLFVPSTVQLESAPLQTSAAE 306

Query: 1075 PSHFLATTNVETEKHPVVSTEMQIVDKSVVEEEPIVHKNKDIPVNSSSKFLDPNYEEDGD 1254
             +  +  +NVE EKH   S   +++DKSVV+E  +    +     S+++FLD +YE+D D
Sbjct: 307  AAPSVVVSNVEMEKHATQSIVPEVIDKSVVKEATVNPSAEQSSSGSTNRFLDESYEDDAD 366

Query: 1255 EWLEDENSEMMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSSKAVTVNSSKKESRDW 1434
            +WL++E++  M   +   +  GN                           +SS K+SRDW
Sbjct: 367  DWLKEEDTSEMVGPSGTPVHTGNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDW 426

Query: 1435 VQLEKSSSNSRRDLSVGTGS-IGSEQTHVNDRDGKDHDNKDCSEWLSVDDIDVI 1593
            VQL +SS NS +DL+   G  +GSE +       ++   KD ++WL+VDDIDVI
Sbjct: 427  VQLGRSSPNSDKDLNCVEGKHVGSEHS-----SARNSMTKDSNDWLNVDDIDVI 475


>ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780902 [Glycine max]
          Length = 466

 Score =  329 bits (844), Expect = 1e-87
 Identities = 201/467 (43%), Positives = 271/467 (58%), Gaps = 4/467 (0%)
 Frame = +1

Query: 205  KKDGDIETSSSSDDLNRGVKEDLSELTKTLTRQLWGVASFLAPPPPPVSDWNKWXXXXXX 384
            KK   + T S +    RGVKED SELTK+ +RQLWGVASFLAPPP P+S+ N        
Sbjct: 31   KKPDSVSTPSPTA---RGVKEDFSELTKSFSRQLWGVASFLAPPPDPLSE-NPVADPNPI 86

Query: 385  XXXXXXXXTARITGIRNDFAEIGGRFKNEISKLSSHKAVSEFSKIASTFLPFGNXXXXXX 564
                       I GIRNDFAEI G+FKN I K+S +K VSEF+KIAS+FL  G+      
Sbjct: 87   PTDEEEEDV--IAGIRNDFAEISGKFKNGIFKISGNKTVSEFTKIASSFLQLGSEEEHD- 143

Query: 565  XXXXXXXXLVVGDAVGVTKEVLTFARNIAMHPETWXXXXXXXXXXXXXXXXXXVQQEHAL 744
                      +   +GVT++V+ FAR++A+HPETW                   QQEHAL
Sbjct: 144  ----------LDGVLGVTEDVVAFARSVALHPETWLDFPLPDDEDSDDFDLSDAQQEHAL 193

Query: 745  AVERLAPRLAALRIEICPGYMSEGCFWKIYFVLLHSRLNKHDAELLSTPQIVEARAMLTQ 924
            AVE LAP LAALR+E+CPGYMS+G FWKIYFVL+H RL+K DA +LSTPQI+EARAMLTQ
Sbjct: 194  AVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEARAMLTQ 253

Query: 925  DLQNRT---RSHELSGRGTSFSKDSTNSPQEEHYSSLSDVPSENVSLKTFACEPSHFLAT 1095
             L  R+   +  +LS  G   SK+     +E+H    S+   E V L+T A E +  +  
Sbjct: 254  ALDKRSKEKKESDLSAGGNIPSKE-----EEQHLFVPSNAQLEPVPLQTSAAEAAPSVVV 308

Query: 1096 TNVETEKHPVVSTEMQIVDKSVVEEEPIVHKNKDIPVNSSSKFLDPNYEEDGDEWLEDEN 1275
            ++VE EKH V     +I+DKSVV+E P++   +     S+++FLD  Y++D D+WL++E+
Sbjct: 309  SDVEMEKHVV----PEIIDKSVVKEAPVISSAEQSSSGSTNRFLDETYDDDADDWLKEED 364

Query: 1276 SEMMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSSKAVTVNSSKKESRDWVQLEKSS 1455
            +  M   +  S+  GN                           +SS K+SRDWVQL +SS
Sbjct: 365  TSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDWVQLGRSS 424

Query: 1456 SNSRRDL-SVGTGSIGSEQTHVNDRDGKDHDNKDCSEWLSVDDIDVI 1593
             NS +D+ SV    +GS+ +       ++   KD ++WL+VDDIDVI
Sbjct: 425  PNSDKDINSVEGKHVGSQHS-----SARNSVTKDSNDWLNVDDIDVI 466


>ref|XP_003611548.1| BSD domain containing protein [Medicago truncatula]
            gi|355512883|gb|AES94506.1| BSD domain containing protein
            [Medicago truncatula]
          Length = 481

 Score =  329 bits (843), Expect = 2e-87
 Identities = 200/477 (41%), Positives = 273/477 (57%), Gaps = 6/477 (1%)
 Frame = +1

Query: 181  DPSSNPQNKKDGDIETSSSSDDLNRGVKEDLSELTKTLTRQLWGVASFLAPPPPPVSDWN 360
            +P S  Q     + E+ S+S    RGVK+D+SELTK+ +RQ WGVASFLAPPP    D  
Sbjct: 34   NPKSESQTDPQPESESPSASSPTARGVKDDISELTKSFSRQFWGVASFLAPPPDHDHDSK 93

Query: 361  KWXXXXXXXXXXXXXXTARITGIRNDFAEIGGRFKNEISKLSSHKAVSEFSKIASTFLPF 540
                               I GIR+DFAEI G+FK+ ISKLS +K VSEF+KIAS+FL  
Sbjct: 94   TRDSDPNLADEDV------IAGIRSDFAEISGKFKSGISKLSGNKTVSEFTKIASSFLQI 147

Query: 541  GNXXXXXXXXXXXXXXLVVGDAVGVTKEVLTFARNIAMHPETWXXXXXXXXXXXXXXXXX 720
            G+                +   VGVT+EV+ FARN+AMHPETW                 
Sbjct: 148  GSEEEYD-----------LNGVVGVTEEVVNFARNLAMHPETWLDFPLPDDPDSDDFDLS 196

Query: 721  XVQQEHALAVERLAPRLAALRIEICPGYMSEGCFWKIYFVLLHSRLNKHDAELLSTPQIV 900
              QQEHALAVE LAPRLAALR+E+CPGYMS+GCFWKIYFVLLH +L+K+DA +LSTPQI+
Sbjct: 197  DAQQEHALAVEHLAPRLAALRMELCPGYMSDGCFWKIYFVLLHPKLSKNDAVILSTPQIM 256

Query: 901  EARAMLTQDLQNRTRSHELSGRGTSFSKDSTNSP-----QEEHYSSLSDVPSENVSLKTF 1065
            EARA LTQ +  R++  +          D +N P     QE+H S  S+   E+V L+T 
Sbjct: 257  EARATLTQAIDRRSKEKK--------EVDLSNIPSKVEEQEQHLSVPSNAQLESVPLQTS 308

Query: 1066 ACEPSHFLATTNVETEKHPVVSTEMQIVDKSVVEEEPIVHKNKDIPVNSSSKF-LDPNYE 1242
            A E +  +  +NV+TE+H V S   Q ++KSVV+E PI    +    +S+ +F  + + E
Sbjct: 309  AVEEAPPMVVSNVKTEEHSVKSDVTQPIEKSVVKETPINPSAEQSSSSSAKRFSYEESDE 368

Query: 1243 EDGDEWLEDENSEMMGSFNQNSIPLGNXXXXXXXXXXXXXXXXXTPTSSKAVTVNSSKKE 1422
            +D D+WL++E+S  +   +  +   G+                   ++ K    +SS K+
Sbjct: 369  DDADDWLKEEDSSEIVGPSGTTNHTGDEEDVSFSDLEEEEDGDVHASNKKTSGSDSSTKD 428

Query: 1423 SRDWVQLEKSSSNSRRDLSVGTGSIGSEQTHVNDRDGKDHDNKDCSEWLSVDDIDVI 1593
            SRDWVQL KSS NS +D++    S+ S          ++  +KD ++WL+VDDIDVI
Sbjct: 429  SRDWVQLGKSSPNSDKDIN----SMESRHAGSGLSSARNSVSKDSNDWLNVDDIDVI 481


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