BLASTX nr result

ID: Coptis23_contig00000296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000296
         (2004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   804   0.0  
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   801   0.0  
ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   800   0.0  
ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|2...   793   0.0  
ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis...   788   0.0  

>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
            gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
            amidohydrolase [Arabidopsis thaliana]
            gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
            [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
            pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  804 bits (2076), Expect = 0.0
 Identities = 385/466 (82%), Positives = 434/466 (93%)
 Frame = +2

Query: 320  ADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNG 499
            ADVYVENGIIV VQPNIKVGD+VTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+G
Sbjct: 63   ADVYVENGIIVAVQPNIKVGDEVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSG 122

Query: 500  QAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEI 679
            QAAALAGGTTMHIDFVIPVNG+L AGFE Y  K+  SCMDYGFHMAITKWDE V+RDME+
Sbjct: 123  QAAALAGGTTMHIDFVIPVNGNLVAGFEAYENKSRESCMDYGFHMAITKWDEGVSRDMEM 182

Query: 680  MVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMID 859
            +V+EKGINSFKFFLAYKG LMV+D+LLL+G K+CKSLGALAMVHAENGDAV EGQ RMI+
Sbjct: 183  LVKEKGINSFKFFLAYKGSLMVTDDLLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIE 242

Query: 860  LGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 1039
            LGITGPEGHALSRPPVLEGEAT+R IRLA F+NTPLYVVHVMS+DAM+EIAKARKSGQ+V
Sbjct: 243  LGITGPEGHALSRPPVLEGEATARAIRLARFINTPLYVVHVMSVDAMDEIAKARKSGQKV 302

Query: 1040 IGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCT 1219
            IGEP+VSGL+LDD WLW+ DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT
Sbjct: 303  IGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCT 362

Query: 1220 YNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIY 1399
            +NSTQKALG+DDFR+IPNGVNG+EERMHLIWDTMVESGQ+S T +V++TSTECA+IFNIY
Sbjct: 363  FNSTQKALGLDDFRRIPNGVNGLEERMHLIWDTMVESGQLSATDYVRITSTECARIFNIY 422

Query: 1400 PRKGAIFAGSDADIIIFNPNSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWE 1579
            PRKGAI AGSDADIII NPNSS+EIS++SHHSRSDTNVYEGRRGKGKVEVTI+GGRIVWE
Sbjct: 423  PRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGKGKVEVTIAGGRIVWE 482

Query: 1580 NDELKVVPGSGKYIKMPPFGHMFSGMDKIDAAYLSSLHAPVQRLRT 1717
            N+ELKVVP SGKYI+MPPF ++F G++K DA YLSSL APV+R+RT
Sbjct: 483  NEELKVVPRSGKYIEMPPFSYLFDGIEKSDANYLSSLRAPVKRVRT 528


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
            gi|297319392|gb|EFH49814.1| dihydropyrimidinase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  801 bits (2070), Expect = 0.0
 Identities = 386/466 (82%), Positives = 433/466 (92%)
 Frame = +2

Query: 320  ADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNG 499
            ADVYVE+GIIV VQPNIKVGD+VTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+G
Sbjct: 63   ADVYVEDGIIVAVQPNIKVGDEVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSG 122

Query: 500  QAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEI 679
            QAAALAGGTTMHIDFVIP+NG+L AGFE Y  K+  SCMDYGFHMAITKWDE V+RDMEI
Sbjct: 123  QAAALAGGTTMHIDFVIPINGNLVAGFEAYENKSRESCMDYGFHMAITKWDEGVSRDMEI 182

Query: 680  MVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMID 859
            +V+EKGINSFKFFLAYKG LMV+D+LLL+G K+CKSLGALAMVHAENGDAV EGQ RMI+
Sbjct: 183  LVKEKGINSFKFFLAYKGSLMVTDDLLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIE 242

Query: 860  LGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 1039
            LGITGPEGHALSRPPVLEGEAT+R IRLA FVNTPLYVVHVMS+DAM+EIAKARKSGQ+V
Sbjct: 243  LGITGPEGHALSRPPVLEGEATARAIRLARFVNTPLYVVHVMSVDAMDEIAKARKSGQKV 302

Query: 1040 IGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCT 1219
            IGEP+VSGL+LDD WLW+ DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT
Sbjct: 303  IGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCT 362

Query: 1220 YNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIY 1399
            +NSTQKALG+DDFRKIPNGVNG+EERMHLIWDTMV SGQIS T +V++TSTE A+IFNIY
Sbjct: 363  FNSTQKALGLDDFRKIPNGVNGLEERMHLIWDTMVGSGQISATDYVRITSTESARIFNIY 422

Query: 1400 PRKGAIFAGSDADIIIFNPNSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWE 1579
            PRKGAI AGSDADIII NPNSS+EIS++SHHSRSDTNVYEGRRGKGKVEVTI+GGRIVWE
Sbjct: 423  PRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGKGKVEVTIAGGRIVWE 482

Query: 1580 NDELKVVPGSGKYIKMPPFGHMFSGMDKIDAAYLSSLHAPVQRLRT 1717
            N+ELKVVPGSGKYI+MPPF ++F G++K DA YLSSL APV+R+RT
Sbjct: 483  NEELKVVPGSGKYIEMPPFSYLFDGIEKSDANYLSSLRAPVKRVRT 528


>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
            gi|296083879|emb|CBI24267.3| unnamed protein product
            [Vitis vinifera]
          Length = 536

 Score =  800 bits (2067), Expect = 0.0
 Identities = 390/467 (83%), Positives = 431/467 (92%)
 Frame = +2

Query: 320  ADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNG 499
            ADVYVE+GIIV V+PNIKVGDDVTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+G
Sbjct: 69   ADVYVEDGIIVAVKPNIKVGDDVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSG 128

Query: 500  QAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEI 679
            QAAALAGGTTMHIDFVIPV GSLS G E Y  KA++SCMDYGFHMAITKWDE V+R+MEI
Sbjct: 129  QAAALAGGTTMHIDFVIPVKGSLSKGLEAYKDKAKKSCMDYGFHMAITKWDENVSREMEI 188

Query: 680  MVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMID 859
            MV+EKGINSFKFFLAYKG LM++DELLL+G KKCKSLGALAMVHAENGDAV EGQ RMI+
Sbjct: 189  MVKEKGINSFKFFLAYKGALMINDELLLEGLKKCKSLGALAMVHAENGDAVFEGQKRMIE 248

Query: 860  LGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 1039
            LGITGPEGHALSRPPVLEGEAT+R IRLA+FVNTPLYVVHVMSIDAMEEIAKARKSGQRV
Sbjct: 249  LGITGPEGHALSRPPVLEGEATARAIRLASFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 308

Query: 1040 IGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCT 1219
            IGEP+VSGLVLDDS LW+ DF  AAKYVMSPPIR LGH KALQAALSTG LQLVGTDHC 
Sbjct: 309  IGEPVVSGLVLDDSGLWDPDFINAAKYVMSPPIRALGHDKALQAALSTGNLQLVGTDHCA 368

Query: 1220 YNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIY 1399
            +NSTQKA GIDDFRKIPNGVNGIEERMHL+WDTMVESGQISVT +V++TSTECA+IFN+Y
Sbjct: 369  FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRITSTECARIFNMY 428

Query: 1400 PRKGAIFAGSDADIIIFNPNSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWE 1579
            PRKGAI AGSDADIII NPNSSF+I+ARSHHSR DTNV+EGR+GKGKVEVTI+GG+IVWE
Sbjct: 429  PRKGAILAGSDADIIILNPNSSFQITARSHHSRLDTNVFEGRKGKGKVEVTIAGGKIVWE 488

Query: 1580 NDELKVVPGSGKYIKMPPFGHMFSGMDKIDAAYLSSLHAPVQRLRTA 1720
            NDELK VPGSGKYI+M PF ++F+G+DK+DA YLSSL APVQR + A
Sbjct: 489  NDELKAVPGSGKYIEMQPFSYLFNGIDKVDAKYLSSLQAPVQRSKAA 535


>ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|222847228|gb|EEE84775.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  793 bits (2049), Expect = 0.0
 Identities = 383/466 (82%), Positives = 434/466 (93%)
 Frame = +2

Query: 320  ADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNG 499
            ADVYV++GIIV V+PN++VGDDV V+DATGK+VMPGGIDPHTHL ++  NTESVDDFF+G
Sbjct: 39   ADVYVKDGIIVAVKPNLRVGDDVKVIDATGKFVMPGGIDPHTHLAVEALNTESVDDFFSG 98

Query: 500  QAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEI 679
            QAAALAGGTTMHIDFVIPVNGSL AG + Y KKA++SCMDYGFHM ITK+D++V+RDMEI
Sbjct: 99   QAAALAGGTTMHIDFVIPVNGSLIAGLKAYEKKAKKSCMDYGFHMVITKFDDIVSRDMEI 158

Query: 680  MVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMID 859
            MV+EKGINSFKFFLAYKG+LMV+DELLL+G K+CKSLGALAMVHAENGDAV EGQ RMI 
Sbjct: 159  MVKEKGINSFKFFLAYKGVLMVNDELLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIQ 218

Query: 860  LGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 1039
            LGITGPEGHALSRPP+LEGEAT+R IRLA FVNTPLYVVHVMSIDAMEEIAKARKSGQRV
Sbjct: 219  LGITGPEGHALSRPPLLEGEATARAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 278

Query: 1040 IGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCT 1219
            +GEP+VSGL LDDS LW++DFTTA+KYVMSPPIR  GHGKALQ ALS G+LQLVGTDHC 
Sbjct: 279  VGEPVVSGLALDDSGLWDSDFTTASKYVMSPPIRASGHGKALQDALSNGVLQLVGTDHCV 338

Query: 1220 YNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIY 1399
            +NSTQKA GIDDFRKIPNGVNGIEERMHL+WD MVESGQISVT +V+VTSTECA+IFNIY
Sbjct: 339  FNSTQKASGIDDFRKIPNGVNGIEERMHLVWDLMVESGQISVTDYVRVTSTECARIFNIY 398

Query: 1400 PRKGAIFAGSDADIIIFNPNSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWE 1579
            PRKGAI AGSDADIII NPNS+FEI+ARSHHSR+DTNVYEGRRGKGKVEVTI+GGR+VWE
Sbjct: 399  PRKGAIIAGSDADIIILNPNSTFEINARSHHSRTDTNVYEGRRGKGKVEVTIAGGRVVWE 458

Query: 1580 NDELKVVPGSGKYIKMPPFGHMFSGMDKIDAAYLSSLHAPVQRLRT 1717
            N+ELKVVPGSGKYI+M PF ++FSG+D+ DA+YLSSL+APV+R ++
Sbjct: 459  NNELKVVPGSGKYIEMAPFSYLFSGIDRADASYLSSLNAPVKRFKS 504


>ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis sativus]
            gi|449480993|ref|XP_004156050.1| PREDICTED:
            dihydropyrimidinase-like [Cucumis sativus]
          Length = 528

 Score =  788 bits (2036), Expect = 0.0
 Identities = 382/467 (81%), Positives = 429/467 (91%)
 Frame = +2

Query: 320  ADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNG 499
            ADVYVE+GIIV V+ NIKVGDDV V+DATGKYVMPGGIDPHTHL  ++  TE+VDDFF G
Sbjct: 61   ADVYVEDGIIVAVKRNIKVGDDVAVVDATGKYVMPGGIDPHTHLAFEFMGTETVDDFFTG 120

Query: 500  QAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEI 679
            QAAALAGGTTMHIDFVIPVNGSLSAGFE Y KKA++SCMDYGFHMAITKWDEVVA++MEI
Sbjct: 121  QAAALAGGTTMHIDFVIPVNGSLSAGFESYVKKAKKSCMDYGFHMAITKWDEVVAQEMEI 180

Query: 680  MVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMID 859
            MV+EKGINSFKFFLAYKG LM+SDELLLQG KKCKSLGALAMVHAENGDAV EGQ RMI+
Sbjct: 181  MVKEKGINSFKFFLAYKGALMISDELLLQGLKKCKSLGALAMVHAENGDAVFEGQERMIE 240

Query: 860  LGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRV 1039
            LGITGPEGHALSRP VLEGEATSR IRLA+FVNTPLYVVHVMSIDAMEEIAKARK+GQ+V
Sbjct: 241  LGITGPEGHALSRPAVLEGEATSRAIRLASFVNTPLYVVHVMSIDAMEEIAKARKAGQKV 300

Query: 1040 IGEPIVSGLVLDDSWLWNNDFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCT 1219
            IGEP+VSGLVLD+S LW+ DF TAAKYVMSPPIR  GH KALQAALSTG+LQLVGTDHC 
Sbjct: 301  IGEPVVSGLVLDESGLWDPDFVTAAKYVMSPPIRSSGHDKALQAALSTGVLQLVGTDHCV 360

Query: 1220 YNSTQKALGIDDFRKIPNGVNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIY 1399
            +NSTQK++GIDDFRKIPNGVNGIEERMHL+W+TMVESGQISV  +V++TSTECA+IFNIY
Sbjct: 361  FNSTQKSIGIDDFRKIPNGVNGIEERMHLVWNTMVESGQISVRDYVRITSTECARIFNIY 420

Query: 1400 PRKGAIFAGSDADIIIFNPNSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWE 1579
            P+KGAI AGSDADIII NPN+SFEIS++ HHSR+DTNVYEG++GKGKVEVTISGG+IVWE
Sbjct: 421  PKKGAILAGSDADIIILNPNASFEISSKHHHSRTDTNVYEGKKGKGKVEVTISGGKIVWE 480

Query: 1580 NDELKVVPGSGKYIKMPPFGHMFSGMDKIDAAYLSSLHAPVQRLRTA 1720
            NDEL+V+PG+GKYI+MP F ++F G+ K DA YLSS  APV+R  ++
Sbjct: 481  NDELRVIPGAGKYIEMPAFNYLFDGIYKADAQYLSSTRAPVKRFHSS 527


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