BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000295
         (3084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32444.3| unnamed protein product [Vitis vinifera]              311   e-121
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   306   e-119
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   288   e-116
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   288   e-116
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   287   e-115

>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  311 bits (797), Expect(2) = e-121
 Identities = 149/192 (77%), Positives = 171/192 (89%)
 Frame = +1

Query: 1591 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1770
            S +  K++W+GDL  WMD+NYL TCFG TGEVSSIK+IRNKQTGQSEGYGFV F+SRA A
Sbjct: 4    STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63

Query: 1771 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVASDHSIFVGDLAPDVTDILLHETF 1950
            EKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD  SD SIFVGDLA DVTD LL ETF
Sbjct: 64   EKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQETF 122

Query: 1951 ASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 2130
            A+RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+
Sbjct: 123  ATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPK 182

Query: 2131 KATGHQQQYSSQ 2166
            KA+G+QQQYSSQ
Sbjct: 183  KASGYQQQYSSQ 194



 Score =  152 bits (384), Expect(2) = e-121
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = +3

Query: 2271 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 2450
            Q + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 213  QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 272

Query: 2451 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 2543
            LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 273  LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303



 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
 Frame = +1

Query: 1609 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1785
            SI++GDL   + +  L   F  +   V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 103  SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 162

Query: 1786 AYNGTLMPNSDQPFRLNWAS---------------------------FSTGERRGTDVAS 1884
              NG     S +P R+  A+                            + G +   D ++
Sbjct: 163  EMNGIYC--SSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGD-ST 219

Query: 1885 DHSIFVGDLAPDVTDILLHETFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRA 2064
            + +IFVG L  +VTD  L ++F S++  V   K+ +       KG GFV+FA+ N    A
Sbjct: 220  NTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRNSAEDA 272

Query: 2065 IDEMNGQFCSSRPMRI 2112
            +  +NG     + +R+
Sbjct: 273  LQRLNGTVIGKQTVRL 288


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  306 bits (784), Expect(2) = e-119
 Identities = 149/194 (76%), Positives = 171/194 (88%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1591 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEV--SSIKVIRNKQTGQSEGYGFVVFYSRA 1764
            S +  K++W+GDL  WMD+NYL TCFG TGEV  SSIK+IRNKQTGQSEGYGFV F+SRA
Sbjct: 76   STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135

Query: 1765 AAEKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVASDHSIFVGDLAPDVTDILLHE 1944
             AEKIL +YNGTLMPN++QPFRLNWA+FSTG+RR TD  SD SIFVGDLA DVTD LL E
Sbjct: 136  TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQE 194

Query: 1945 TFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVAT 2124
            TFA+RY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVAT
Sbjct: 195  TFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT 254

Query: 2125 PRKATGHQQQYSSQ 2166
            P+KA+G+QQQYSSQ
Sbjct: 255  PKKASGYQQQYSSQ 268



 Score =  152 bits (384), Expect(2) = e-119
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = +3

Query: 2271 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 2450
            Q + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 287  QANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDA 346

Query: 2451 LQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 2543
            LQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 347  LQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 377



 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
 Frame = +1

Query: 1609 SIWIGDLQYWMDENYLNTCFG-QTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1785
            SI++GDL   + +  L   F  +   V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 177  SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 236

Query: 1786 AYNGTLMPNSDQPFRLNWAS---------------------------FSTGERRGTDVAS 1884
              NG     S +P R+  A+                            + G +   D ++
Sbjct: 237  EMNGIYC--SSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGD-ST 293

Query: 1885 DHSIFVGDLAPDVTDILLHETFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRA 2064
            + +IFVG L  +VTD  L ++F S++  V   K+ +       KG GFV+FA+ N    A
Sbjct: 294  NTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRNSAEDA 346

Query: 2065 IDEMNGQFCSSRPMRI 2112
            +  +NG     + +R+
Sbjct: 347  LQRLNGTVIGKQTVRL 362


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  288 bits (738), Expect(2) = e-116
 Identities = 137/191 (71%), Positives = 163/191 (85%)
 Frame = +1

Query: 1591 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1770
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1771 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVASDHSIFVGDLAPDVTDILLHETF 1950
            EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D   D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1951 ASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 2130
            A +Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 2131 KATGHQQQYSS 2163
            K++G+QQQYSS
Sbjct: 258  KSSGYQQQYSS 268



 Score =  160 bits (406), Expect(2) = e-116
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = +3

Query: 2271 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 2450
            Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 280  QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 339

Query: 2451 LQNLSGTVIGKQTVRLSWGRNPANKQSRTD 2540
            LQ L+GTVIGKQTVRLSWGRNPANKQ R D
Sbjct: 340  LQKLNGTVIGKQTVRLSWGRNPANKQMRAD 369



 Score = 71.2 bits (173), Expect = 2e-09
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
 Frame = +1

Query: 1609 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1785
            SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 178  SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237

Query: 1786 AYNGTLM-----------PNSDQPFRLNWASFSTGERRGTDVASDH-----SIFVGDLAP 1917
              NG              P     ++  ++S       G  V SD      +IFVG L P
Sbjct: 238  EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 297

Query: 1918 DVTDILLHETFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSS 2097
            +V+D  L + F S+Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     
Sbjct: 298  NVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 350

Query: 2098 RPMRI 2112
            + +R+
Sbjct: 351  QTVRL 355


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  288 bits (738), Expect(2) = e-116
 Identities = 137/191 (71%), Positives = 163/191 (85%)
 Frame = +1

Query: 1591 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1770
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1771 EKILQAYNGTLMPNSDQPFRLNWASFSTGERRGTDVASDHSIFVGDLAPDVTDILLHETF 1950
            EK+LQ Y G LMPN+DQPFRLNWA+FS G++R +D   D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1951 ASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 2130
            A +Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 2131 KATGHQQQYSS 2163
            K++G+QQQYSS
Sbjct: 258  KSSGYQQQYSS 268



 Score =  160 bits (406), Expect(2) = e-116
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = +3

Query: 2271 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 2450
            Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+A
Sbjct: 271  QSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDA 330

Query: 2451 LQNLSGTVIGKQTVRLSWGRNPANKQSRTD 2540
            LQ L+GTVIGKQTVRLSWGRNPANKQ R D
Sbjct: 331  LQKLNGTVIGKQTVRLSWGRNPANKQMRAD 360



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
 Frame = +1

Query: 1609 SIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1785
            SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 178  SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237

Query: 1786 AYNGTLMPNSDQPFRLNWAS--FSTG--ERRGTDVASDH-----SIFVGDLAPDVTDILL 1938
              NG     S +P R+  A+   S+G  ++  + V SD      +IFVG L P+V+D  L
Sbjct: 238  EMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDL 295

Query: 1939 HETFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRI 2112
             + F S+Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     + +R+
Sbjct: 296  RQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRL 346


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  287 bits (734), Expect(2) = e-115
 Identities = 138/183 (75%), Positives = 157/183 (85%)
 Frame = +1

Query: 1603 NKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKIL 1782
            NK+IWIGDL +WMDENYL+ CF  TGE+SSIKVIRNKQTG SEGYGFV FYS A AEK+L
Sbjct: 72   NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 131

Query: 1783 QAYNGTLMPNSDQPFRLNWASFSTGERRGTDVASDHSIFVGDLAPDVTDILLHETFASRY 1962
            Q Y G LMPN++QPFRLNWA+FSTG++ G+D   D SIFVGDLA DVTD LLHETFAS Y
Sbjct: 132  QNYAGILMPNAEQPFRLNWATFSTGDK-GSDNVPDLSIFVGDLAADVTDSLLHETFASVY 190

Query: 1963 QSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATG 2142
             SVK AKVV DANTGRSKGYGFVRF DDNE+++A+ +MNG +CSSRPMRIG ATPRK++G
Sbjct: 191  PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSG 250

Query: 2143 HQQ 2151
            HQQ
Sbjct: 251  HQQ 253



 Score =  158 bits (399), Expect(2) = e-115
 Identities = 75/90 (83%), Positives = 82/90 (91%)
 Frame = +3

Query: 2271 QTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEA 2450
            Q++ DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AEEA
Sbjct: 263  QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEA 322

Query: 2451 LQNLSGTVIGKQTVRLSWGRNPANKQSRTD 2540
            LQ L+GT IGKQTVRLSWGRNPANKQ R D
Sbjct: 323  LQKLNGTTIGKQTVRLSWGRNPANKQFRMD 352



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
 Frame = +1

Query: 1609 SIWIGDLQYWMDENYLNTCFGQT-GEVSSIKVIRNKQTGQSEGYGFVVFYSRAAAEKILQ 1785
            SI++GDL   + ++ L+  F      V + KV+ +  TG+S+GYGFV F       + + 
Sbjct: 167  SIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 226

Query: 1786 AYNGTLMPNSDQPFRLNWAS-----------FSTGERRGTDVASDHS-IFVGDLAPDVTD 1929
              NG     S +P R+  A+            S G    ++  S ++ IFVG L P+V+D
Sbjct: 227  QMNGVYC--SSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSD 284

Query: 1930 ILLHETFASRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMR 2109
              L + F S+Y  +   K+ +       KG GFV+FA+ N    A+ ++NG     + +R
Sbjct: 285  EDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIGKQTVR 337

Query: 2110 I 2112
            +
Sbjct: 338  L 338