BLASTX nr result

ID: Coptis23_contig00000279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000279
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|2...   259   1e-66
ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [...   252   2e-64
ref|XP_002528014.1| conserved hypothetical protein [Ricinus comm...   245   2e-62
ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [G...   243   1e-61
ref|XP_003630355.1| Transcription factor HBP-1b(c1) [Medicago tr...   240   5e-61

>ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|222853446|gb|EEE90993.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  259 bits (661), Expect = 1e-66
 Identities = 139/246 (56%), Positives = 167/246 (67%), Gaps = 2/246 (0%)
 Frame = -1

Query: 1155 RDSFNKFFQSWIDEQDRHLHELISVSKTQAETK-SSRDEQERVLRPLIDRVVQHYENYYR 979
            R++F KFF+ W+ EQ+ +L +LIS  K     K +S    +  L+PLI+RV++HYE+YYR
Sbjct: 4    RETFRKFFECWLAEQNNYLEQLISSCKDYDHNKKNSPQSSQATLQPLINRVLEHYEHYYR 63

Query: 978  TKTISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLAEIIRGL 799
             K+   K DVLS+LSPSWTSTLE AFLWIGGWRPS+AFHLLYSKSG Q+E++L E+I GL
Sbjct: 64   AKSRWAKDDVLSMLSPSWTSTLEHAFLWIGGWRPSVAFHLLYSKSGHQLEAQLHELICGL 123

Query: 798  GTGDLGDLSPSQLVSVDELQRKTIREERSITEKMAKHQETVADTSMVELSHIMTEFQNRE 619
            GTGDLGDLS SQL  VD+LQRKTIREE  +TEK  KHQETVAD+SMVEL+H     +N  
Sbjct: 124  GTGDLGDLSGSQLTRVDQLQRKTIREENELTEKHVKHQETVADSSMVELAH-----ENTG 178

Query: 618  IDDERVNSTLGP-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLIAAAELHLRIHD 442
             D+ERV STL P K                                FLIAAAELHLR+HD
Sbjct: 179  TDEERVESTLAPRKDGLQEILQMADDLRVRTIKGVIDILTPIQAVHFLIAAAELHLRLHD 238

Query: 441  WGKKKD 424
            WGKK D
Sbjct: 239  WGKKGD 244


>ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [Vitis vinifera]
            gi|296082614|emb|CBI21619.3| unnamed protein product
            [Vitis vinifera]
          Length = 255

 Score =  252 bits (643), Expect = 2e-64
 Identities = 135/258 (52%), Positives = 165/258 (63%), Gaps = 2/258 (0%)
 Frame = -1

Query: 1176 MQKVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQH 997
            M       + F+KFF+SW+ EQ++HL ELIS S+    T    D+ +++L PL++RVV H
Sbjct: 1    MASSPANHEGFHKFFESWLTEQNQHLQELISASRNNQHT----DDSDQILCPLVERVVSH 56

Query: 996  YENYYRTKTISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLA 817
            Y NYY  K++S + ++LS+L+P W S LEDAFLW+GGWRPS+AFHLLYSKSGLQ ES LA
Sbjct: 57   YHNYYHAKSLSTRDNILSMLTPPWRSLLEDAFLWVGGWRPSVAFHLLYSKSGLQFESGLA 116

Query: 816  EIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERSITEKMAKHQETVADTSMVELSHIMT 637
            ++IRGL TGDLGD+S  QL  VDELQRKTIREER +TE MA+ QETVAD+ MVELS   T
Sbjct: 117  DLIRGLSTGDLGDMSHEQLCRVDELQRKTIREEREMTENMARIQETVADSKMVELSEAAT 176

Query: 636  EFQNREID-DERVNSTLGPK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLIAAAE 463
            E      D  ERV S L  K                                 FLIAAAE
Sbjct: 177  EEGGGGDDLGERVESALKHKEEGLAEMLLKADDLRLRTLKGVLDILTPMQCVHFLIAAAE 236

Query: 462  LHLRIHDWGKKKDAAQNH 409
            LHLR+H WGK KD  Q+H
Sbjct: 237  LHLRLHKWGKNKDEQQHH 254


>ref|XP_002528014.1| conserved hypothetical protein [Ricinus communis]
            gi|223532583|gb|EEF34370.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 271

 Score =  245 bits (626), Expect = 2e-62
 Identities = 134/258 (51%), Positives = 169/258 (65%), Gaps = 7/258 (2%)
 Frame = -1

Query: 1176 MQKVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQH 997
            ++   +  +SF+ FF+ W+ EQ + L ELIS SK +   K++  +    L+PLI+RV++H
Sbjct: 12   LRSTSSSHNSFHDFFEWWLVEQKQELDELISASKQKLNNKNNNHDS---LQPLINRVLEH 68

Query: 996  YENYYRTKTISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLA 817
            YE YY  K+   K DVL++ SPSWTS LEDAFLWIGGWRPSMAFHLLYSKSGLQ+E++L 
Sbjct: 69   YEQYYSAKSKWAKHDVLAMFSPSWTSPLEDAFLWIGGWRPSMAFHLLYSKSGLQLEAQLH 128

Query: 816  EIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERSITEKMAKHQETVADTSMVELSHIMT 637
            ++IRGL TGDLGDLSP+QLV VDE QR+ IREE++ITE MAKHQ TVADTSMVEL+H ++
Sbjct: 129  DVIRGLCTGDLGDLSPNQLVQVDEFQRRIIREEKNITENMAKHQATVADTSMVELTHAIS 188

Query: 636  EFQNREID------DERVNSTLGPK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFL 478
            + +  E         ERV STL  K                                 FL
Sbjct: 189  KTRRDEGSSIGNEVQERVESTLKTKLEGLEKVLQKADDLRLRTLKGIIDILTPDQTVHFL 248

Query: 477  IAAAELHLRIHDWGKKKD 424
            IAAAELHLR+H+ GKK D
Sbjct: 249  IAAAELHLRLHELGKKMD 266


>ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [Glycine max]
          Length = 285

 Score =  243 bits (619), Expect = 1e-61
 Identities = 135/272 (49%), Positives = 176/272 (64%), Gaps = 10/272 (3%)
 Frame = -1

Query: 1158 ERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLIDRVVQHYENYYR 979
            E +SF+KFF+ WI EQ +HL +L++   TQ  +    DE+   L+ L D+VV+HYE YY+
Sbjct: 20   ESESFHKFFECWISEQKQHLKDLLAAESTQLIS----DEE---LQALNDKVVEHYEYYYK 72

Query: 978  TKTISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQMESKLAEIIRGL 799
             K+   KQDVL++LSP+W S+LE+AFLWIGGWRPSMAFHL+YSKSGLQ E++L E+++GL
Sbjct: 73   AKSRCAKQDVLAMLSPTWMSSLEEAFLWIGGWRPSMAFHLIYSKSGLQFEARLDEVLQGL 132

Query: 798  GTGDLGDLSPSQLVSVDELQRKTIREERSITEKMAKHQETVADTSMVELSHIMTEF---- 631
             T DLGDLS SQL  +DE+QR+TI EER IT+ MA+HQETVAD SMVELSH+++E     
Sbjct: 133  RTHDLGDLSASQLAQLDEMQRRTILEEREITDLMARHQETVADASMVELSHVVSEMIRAN 192

Query: 630  QNREID-----DERVNSTLGPK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLIAA 469
            Q  E+D     + +V STL  K                                 FLIAA
Sbjct: 193  QRGEVDQSKEIENKVESTLVLKEEGLEKILLKADELRFITLKDVVDVLTPKQAIHFLIAA 252

Query: 468  AELHLRIHDWGKKKDAAQNHSNSTGAGAGHTN 373
            AELHLR+H+WGKK D A+  +   G G  H +
Sbjct: 253  AELHLRLHEWGKKMD-ARKCNQGFGEGKSHNS 283


>ref|XP_003630355.1| Transcription factor HBP-1b(c1) [Medicago truncatula]
            gi|355524377|gb|AET04831.1| Transcription factor
            HBP-1b(c1) [Medicago truncatula]
          Length = 272

 Score =  240 bits (613), Expect = 5e-61
 Identities = 131/280 (46%), Positives = 176/280 (62%), Gaps = 7/280 (2%)
 Frame = -1

Query: 1191 MSLWPMQKVETERDSFNKFFQSWIDEQDRHLHELISVSKTQAETKSSRDEQERVLRPLID 1012
            MSL P    + E  SFNKFF+ W+ EQ+++L+EL++    Q +  + R      +  LID
Sbjct: 2    MSLLPSNGNDAE--SFNKFFECWMVEQNKYLNELVAAKSAQPQLTNDR------MHTLID 53

Query: 1011 RVVQHYENYYRTKTISGKQDVLSVLSPSWTSTLEDAFLWIGGWRPSMAFHLLYSKSGLQM 832
            +VV+HYE YY+TK+   K+DVLS+ SP W STLE+AFLWIGGWRPSMAFHLLYSK  +Q 
Sbjct: 54   KVVEHYECYYKTKSSFAKKDVLSMFSPPWLSTLEEAFLWIGGWRPSMAFHLLYSKCSMQF 113

Query: 831  ESKLAEIIRGLGTGDLGDLSPSQLVSVDELQRKTIREERSITEKMAKHQETVADTSMVEL 652
            +++L ++I+G  T DLGDL+ SQL   D+LQ+KTIREER IT+ +A+HQETVAD  MVEL
Sbjct: 114  QARLNDLIQGQKTCDLGDLTASQLAEFDDLQKKTIREEREITDMLAEHQETVADAPMVEL 173

Query: 651  SHIMTEF------QNREIDDERVNSTLGPK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
            SH+++E       + +E+ +ER+ S L PK                              
Sbjct: 174  SHVVSEMIRGGENEKKEL-EERIESVLEPKVEGLEKILYRADDLRLRALQGIVNILTPKQ 232

Query: 492  XXXFLIAAAELHLRIHDWGKKKDAAQNHSNSTGAGAGHTN 373
               FLIAAAELHLR+H+WGKKKD A+  +     G  H +
Sbjct: 233  AIHFLIAAAELHLRLHEWGKKKDDAKKGNQGIREGEIHNS 272


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