BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000277
         (1701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245...   335   3e-89
ref|XP_002312802.1| bromodomain protein [Populus trichocarpa] gi...   317   5e-84
ref|XP_002520929.1| bromodomain-containing protein [Ricinus comm...   295   2e-77
emb|CBI37739.3| unnamed protein product [Vitis vinifera]              287   7e-75
ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244...   263   1e-67

>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score =  335 bits (858), Expect = 3e-89
 Identities = 230/505 (45%), Positives = 295/505 (58%), Gaps = 36/505 (7%)
 Frame = +2

Query: 2    KDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQGSDDNELQQTIVKRGRPPTT 181
            KDVFLICSNAM+YNA DTIYF+QARSI+ELAKKNFEN+RQ SDDNE +    +RGRPPT 
Sbjct: 240  KDVFLICSNAMQYNAPDTIYFKQARSIQELAKKNFENLRQDSDDNEPEPK--RRGRPPTK 297

Query: 182  NPKKRLGRPPIVRAGSDLSSGATLADAGEN----NIDLRRGSY--EKSGPSETSGMIDHR 343
            N KK LGRP + R GS+ SS ATLA  GEN    N DLR+G+   +KSGP+++ G   H 
Sbjct: 298  NIKKPLGRPSLERPGSEFSSDATLATGGENTMWSNHDLRKGALISDKSGPADSFGRSLHG 357

Query: 344  SCSNDSFT-WSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSH--LSGRS 514
            +  +D  T WS++     +DEF  S++KGIS+K  KK FVLDE+RRNTYKQS     GR 
Sbjct: 358  TRYSDGNTGWSADQKLERHDEFTGSILKGISLKHAKKPFVLDENRRNTYKQSSSIAVGRE 417

Query: 515  FPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAACLGPVAWKIASKKIERALPTGVKFG 694
             PSVL TF GEKKQLM VGL+ E+G+ARSLARFA+ LGPVAWKIA+KKIE++LP GVKFG
Sbjct: 418  -PSVLTTFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGVKFG 476

Query: 695  PGWVGKNESPLSESLLTIHTPAHLFSEQPFSVSKISSSATIRSIPDVKVDKVS------- 853
            PGWVG+N+         +  P  LF      +S +   +   S+ D + DK S       
Sbjct: 477  PGWVGEND---------VIPPKPLFVPSSTPLSSLPGDSIPCSM-DSQEDKPSQKTGGIG 526

Query: 854  --ERQVPSNNSAADVYLNRISSPSTAASSLV--GNLSSELTTESVEAT-RPKLESRDCLL 1018
              ER V S  +A   +  +    S AAS L+   N +S  ++ S EA+     +S   +L
Sbjct: 527  LPERNVLSARAALANHPGKSLLTSAAASPLINTANKASGPSSGSTEASIGLNAQSGFSIL 586

Query: 1019 SSNADGIMLNPPFQIHQGP-VLNPSVNSL-----WNLASQMDKVVRPLMPVGSVTSAATV 1180
            +S+A  +   PPFQIHQGP  L+P +N       +N+ +QM K +    P G    A   
Sbjct: 587  NSSAGAVRPRPPFQIHQGPTALHPGMNGFNGAYGFNIPTQMGKPMGAARPTGFNLQA--- 643

Query: 1181 HSELHDAFTKTKNGIVQSISMNEIEAGNMKSPESLKATNSEISFVV-PNGEG-------- 1333
              ++ DA ++T          N +   + K  E    TNS    +  P GE         
Sbjct: 644  -PQMLDAISRTTPNFGHPGMGNNLTPEDPKFLEKSTTTNSSSPLLPHPGGEAAAAPRVGP 702

Query: 1334 FQQLSCQDYSQHQKLDSVPPDLNVR 1408
              Q S       Q+ DSVPPDLNVR
Sbjct: 703  HPQPSWPGLPPQQRQDSVPPDLNVR 727


>ref|XP_002312802.1| bromodomain protein [Populus trichocarpa] gi|222849210|gb|EEE86757.1|
            bromodomain protein [Populus trichocarpa]
          Length = 758

 Score =  317 bits (813), Expect = 5e-84
 Identities = 209/512 (40%), Positives = 294/512 (57%), Gaps = 43/512 (8%)
 Frame = +2

Query: 2    KDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQGSDDNELQQTIVKRGRPPTT 181
            ++VFLIC+NAM+YNA DTIYFRQARSI+ELAKKNFEN+RQ SDDNE +  +V+RGRPP+ 
Sbjct: 244  EEVFLICTNAMQYNAPDTIYFRQARSIQELAKKNFENLRQDSDDNEAEPKVVRRGRPPSE 303

Query: 182  NPKKRLGRPPIVRAGSDLSSGATLADAGENNIDLRRGSYEKSGPSETSGMIDHRSCSNDS 361
            N KK  GRP +  AGS+  +G TLA  GEN       S EKSG +++SG        N++
Sbjct: 304  NFKKSPGRPSLDLAGSEFPTGRTLATGGENR------SSEKSGFADSSGQF--HGSRNEA 355

Query: 362  FTWSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSHLS-GRSFPSVLATF 538
            +  S+++    NDE   S++KG   K  KK   LDE+RRNTYKQ H S G   PSVL TF
Sbjct: 356  YL-STDNRFERNDETAGSILKG---KHIKKHLALDENRRNTYKQFHPSAGGRVPSVLTTF 411

Query: 539  RGEKKQLMAVGLHMEHGFARSLARFAACLGPVAWKIASKKIERALPTGVKFGPGWVGKNE 718
              E+KQL+AVGL  EHG+ARS+ARFAA +GP +W IA K+IE++L  GVKFGPGWVG+N+
Sbjct: 412  DAERKQLVAVGLLTEHGYARSIARFAANIGPFSWTIAVKRIEKSLAPGVKFGPGWVGEND 471

Query: 719  SPLSESLLTIHTPAHLF------SEQPFSVSKISSSATIRSIPDVKVDKVS--------- 853
             P  ++L +   P+ L        ++PFSV + S++         K  K+S         
Sbjct: 472  IPPQKALFSSPMPSQLAPPPSLPPQKPFSVLESSAATATACGVKSKQGKLSAKPEKDIFP 531

Query: 854  ERQVPSNNSAADVYLNRISSPSTAASSLVGNLSSELTTESVEATRPKLESRDC--LLSSN 1027
            E+QVPS    ++ + + +   ++  +S+     SE  TE  E+  PKL S     +L+S+
Sbjct: 532  EKQVPSTR-LSEAHFSSVPPSTSMTTSVSAVNKSEPFTERAESV-PKLNSHSAFNVLNSS 589

Query: 1028 ADGIMLNPPFQIHQGPVLNPSVNSL-----WNLASQMDKVVRPLMPVGSVTSAATVHSEL 1192
               +    P Q+HQ P ++P          +NLA+QM K++    P G         S++
Sbjct: 590  TGVMRQTAPSQLHQNPAIHPGTIGFNATYGFNLAAQMGKLIGVARPAG----LGIQSSQM 645

Query: 1193 HDAFTKTKNGIVQSISMNEIEAGNMKSPESLKATNSEISFVVPN--GEGFQQLSCQDYSQ 1366
             D  ++T + +V+S + N I +  MK PE+  +++ +IS  +PN   E  +     D  Q
Sbjct: 646  ADKVSRTNSNLVRSANANSINSEKMKFPEN--SSSIKISGALPNSGNEAVEAPRSVDQEQ 703

Query: 1367 ------------------HQKLDSVPPDLNVR 1408
                              HQK D+VPPDLNVR
Sbjct: 704  PTWQGLYPNPRPDSGSSSHQKSDAVPPDLNVR 735


>ref|XP_002520929.1| bromodomain-containing protein [Ricinus communis]
            gi|223539895|gb|EEF41474.1| bromodomain-containing
            protein [Ricinus communis]
          Length = 767

 Score =  295 bits (755), Expect = 2e-77
 Identities = 216/511 (42%), Positives = 287/511 (56%), Gaps = 42/511 (8%)
 Frame = +2

Query: 2    KDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQGSDDNELQQ--TIVKRGRPP 175
            KDVFLICSNAM+YNA DTIYFRQARSI+ELAKKNFEN+RQ SDDNE +   T+V+RGRPP
Sbjct: 252  KDVFLICSNAMQYNAPDTIYFRQARSIQELAKKNFENLRQDSDDNEPEPEPTVVRRGRPP 311

Query: 176  TTNPKKRLGRPPIVRAGSDLS-SGATLADAGENNI----DLRRGSY--EKSGPSETSGMI 334
            T N KK +GRP + RAGS+ S   ATLA  GE+ I    D R+G    +KSG +++ G  
Sbjct: 312  TKNLKKPVGRPSLDRAGSEYSLDAATLATGGESTIWSNNDHRKGPLVSDKSGFTDSLGRS 371

Query: 335  DH-RSCSNDSFTWSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSHLSGR 511
               RS +N    W +++    N+E   SV+KG S+K+GK+ F LDE+RRNTYKQ  LS  
Sbjct: 372  HGPRSDAN----WLTDNKFERNEEATGSVLKGNSIKYGKRQFGLDENRRNTYKQ--LSAG 425

Query: 512  SFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAACLGPVAWKIASKKIERALPTGVKF 691
              PSVL TF  E+KQLMAVGL  EHG+ARSLARFAA +G VAWKIAS +IER+LP G+KF
Sbjct: 426  REPSVLITFDSERKQLMAVGLLSEHGYARSLARFAANVGAVAWKIASTRIERSLPPGIKF 485

Query: 692  GPGWVGKNE-SPLSESLLTIHTPAHLFSEQPFSVSKISSSATIRSIPDVKVDKVSERQVP 868
            GPGWV +N+ SP    +L+   P      QP S+  ++++AT      +   + +  Q P
Sbjct: 486  GPGWVSENDISPQRAFVLSSPPPGLPLLLQPLSL-PVNTAAT----TSIAESRENLSQKP 540

Query: 869  SNNS-------AADVYLNRISSPSTAAS-SLVGNLSSELTTESVEAT-RPKLESRDCLLS 1021
             NN        A++ +++   SPS ++S S V     E   E  EA  R        LL+
Sbjct: 541  ENNMIEDEKQLASEGHISNALSPSASSSTSPVAAGKPESCAERGEAVERLNSHGGATLLN 600

Query: 1022 SNADGIMLNPPFQIHQGPVLNPSVNSL-----WNLASQMDKVVRPLMPVGSVTSAATVHS 1186
             +A  I  NPP QI+    ++  +N       ++L ++M K+V   MP G    +     
Sbjct: 601  CSASMIRPNPPLQINS---VHRGMNRFNGTYGFDLPAEMGKLVGTSMPAGFNFQS----P 653

Query: 1187 ELHDAFTKTKNGIVQSISMNEIEAGNMKSPESLKATNSEISFVVPNG------------- 1327
            ++ D   K+    V   + N + +   K  E   + N   +   P               
Sbjct: 654  QMIDKILKSNTNFVHPATANSLNSEGPKLSEHSSSINPTGALPNPGNDMEVPRYELEPRP 713

Query: 1328 --EGFQQLSCQD--YSQHQKLDSVPPDLNVR 1408
              +G   L   D   S  QK DSVPPDLNVR
Sbjct: 714  SWQGSLHLPKSDAGLSPQQKSDSVPPDLNVR 744


>emb|CBI37739.3| unnamed protein product [Vitis vinifera]
          Length = 4608

 Score =  287 bits (734), Expect = 7e-75
 Identities = 158/248 (63%), Positives = 190/248 (76%), Gaps = 9/248 (3%)
 Frame = +2

Query: 2    KDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQGSDDNELQQTIVKRGRPPTT 181
            KDVFLICSNAM+YNA DTIYF+QARSI+ELAKKNFEN+RQ SDDNE +    +RGRPPT 
Sbjct: 4311 KDVFLICSNAMQYNAPDTIYFKQARSIQELAKKNFENLRQDSDDNEPEPK--RRGRPPTK 4368

Query: 182  NPKKRLGRPPIVRAGSDLSSGATLADAGEN----NIDLRRGSY--EKSGPSETSGMIDHR 343
            N KK LGRP + R GS+ SS ATLA  GEN    N DLR+G+   +KSGP+++ G   H 
Sbjct: 4369 NIKKPLGRPSLERPGSEFSSDATLATGGENTMWSNHDLRKGALISDKSGPADSFGRSLHG 4428

Query: 344  SCSNDSFT-WSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSH--LSGRS 514
            +  +D  T WS++     +DEF  S++KGIS+K  KK FVLDE+RRNTYKQS     GR 
Sbjct: 4429 TRYSDGNTGWSADQKLERHDEFTGSILKGISLKHAKKPFVLDENRRNTYKQSSSIAVGRE 4488

Query: 515  FPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAACLGPVAWKIASKKIERALPTGVKFG 694
             PSVL TF GEKKQLM VGL+ E+G+ARSLARFA+ LGPVAWKIA+KKIE++LP GVKFG
Sbjct: 4489 -PSVLTTFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGVKFG 4547

Query: 695  PGWVGKNE 718
            PGWVG+N+
Sbjct: 4548 PGWVGEND 4555


>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  263 bits (671), Expect = 1e-67
 Identities = 189/494 (38%), Positives = 260/494 (52%), Gaps = 26/494 (5%)
 Frame = +2

Query: 5    DVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQGSDDNELQQTIVKRGRPPTTN 184
            D+FLICSNAM+YNA DT+YFRQAR+I+ELAK++F N+RQ  DD E Q  IV+RGRPPT +
Sbjct: 233  DIFLICSNAMQYNAPDTVYFRQARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKH 292

Query: 185  PKKRLGRPPIVRAGSDLSSGATLADAGENNI-----DLRRGSYE-KSGPSETSGMIDHRS 346
             KK LG  P+     + SS ATLA  G+N+I     +LR+G    K  P++ S    + S
Sbjct: 293  LKKSLGSSPLEHVAPETSSEATLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGS 352

Query: 347  CSNDSF-TWSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSHLSGRSFPS 523
             ++D++ +W SE     N+EFPAS++KG+S K GKK F LDE+RR+TYK   L+    PS
Sbjct: 353  RNSDNYSSWLSE----WNNEFPASILKGVSTKHGKKPFELDENRRDTYKHP-LASNHEPS 407

Query: 524  VLATFRGEKKQLMAVGLHMEHGFARSLARFAACLGPVAWKIASKKIERALPTGVKFGPGW 703
            VL T  GE KQLM+VGLH +HG+ARSLARFAA LG   WKIA+KKI   LP GV+FGPGW
Sbjct: 408  VLTTLHGELKQLMSVGLHSDHGYARSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGW 467

Query: 704  VGKNESPLSESLLTIHTPAHLFSEQPFSVSKISSSATIRSIPDVKVDKVSERQVPSNNSA 883
            VG+NE+                +++P                      + E Q  SNNS 
Sbjct: 468  VGENEA---------------LAQRP--------------------SLLCENQKSSNNST 492

Query: 884  ADVYLNRISSPSTAASSL-VGNLSS-ELTTESVEATRPKLESRDCLLSSNADGIMLNPPF 1057
                 +    P+T+ SSL V N SS     ES EA R         L+S  +      P 
Sbjct: 493  PP---HPQPPPTTSGSSLFVANRSSLPCKEESGEAVRG--------LNSQIELTSRPAPP 541

Query: 1058 QIHQGPVLNPSVNSL-----WNLASQMDKV------------VRPLMPVGSVTSAATVHS 1186
            +IHQ   ++P +N       +N +SQM                 P   +G V++++++  
Sbjct: 542  EIHQTLGIHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSSTESMPSQKLGMVSNSSSIPI 601

Query: 1187 ELHDAFTKTKNGIVQSISMNEIEAGNMKSPESLKATNSEISFVVPNGEGFQQLSCQDYSQ 1366
                A     +     +S N   + N+ +P SL   ++    ++     +Q L       
Sbjct: 602  HPMQANYFASDRPESPVSSNTPRSRNLAAPGSLMKVHTPPEVLIGGKASWQGLP------ 655

Query: 1367 HQKLDSVPPDLNVR 1408
                  +PPDLNVR
Sbjct: 656  ----QRIPPDLNVR 665