BLASTX nr result

ID: Coptis23_contig00000264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000264
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273830.1| PREDICTED: glutathione S-transferase U17 iso...   120   2e-25
emb|CBI32040.3| unnamed protein product [Vitis vinifera]              119   5e-25
ref|XP_002273737.1| PREDICTED: glutathione S-transferase U17 [Vi...   119   5e-25
emb|CAN72996.1| hypothetical protein VITISV_003925 [Vitis vinifera]   118   1e-24
emb|CBI32039.3| unnamed protein product [Vitis vinifera]              115   9e-24

>ref|XP_002273830.1| PREDICTED: glutathione S-transferase U17 isoform 1 [Vitis vinifera]
          Length = 232

 Score =  120 bits (301), Expect = 2e-25
 Identities = 57/92 (61%), Positives = 66/92 (71%)
 Frame = +3

Query: 3   QYIDEAFTSGPSILPSDPYDRSVARFWGAYIDDKWFSSXXXXXXXXXXXXXXXXIEGVST 182
           QY+DEA++SGPSILPSDPYDR++ARFW AYIDDKWF S                ++ V  
Sbjct: 73  QYVDEAWSSGPSILPSDPYDRAIARFWAAYIDDKWFPSLSGLAKAQGEEAKKAAMDQVLE 132

Query: 183 GIELLEEAFEKISKGKDFFGGDTVGYIDIALG 278
           G  LLEEAF K SKGKDFFGGD +GY+DIALG
Sbjct: 133 GFLLLEEAFGKCSKGKDFFGGDRIGYLDIALG 164


>emb|CBI32040.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +3

Query: 3   QYIDEAFTSGPSILPSDPYDRSVARFWGAYIDDKWFSSXXXXXXXXXXXXXXXXIEGVST 182
           QYIDEA++SGPSILPSDPYDR++ARFWG YIDDKWF                  ++ V  
Sbjct: 73  QYIDEAWSSGPSILPSDPYDRAIARFWGVYIDDKWFPLLGGIGKAQGEEAKKAAVDQVHE 132

Query: 183 GIELLEEAFEKISKGKDFFGGDTVGYIDIALG 278
           G+ LLEEAF K SKGKDFF GD +GY+DIALG
Sbjct: 133 GLMLLEEAFGKCSKGKDFFSGDRIGYLDIALG 164


>ref|XP_002273737.1| PREDICTED: glutathione S-transferase U17 [Vitis vinifera]
          Length = 232

 Score =  119 bits (298), Expect = 5e-25
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +3

Query: 3   QYIDEAFTSGPSILPSDPYDRSVARFWGAYIDDKWFSSXXXXXXXXXXXXXXXXIEGVST 182
           QYIDEA++SGPSILPSDPYDR++ARFWG YIDDKWF                  ++ V  
Sbjct: 73  QYIDEAWSSGPSILPSDPYDRAIARFWGVYIDDKWFPLLGGIGKAQGEEAKKAAVDQVHE 132

Query: 183 GIELLEEAFEKISKGKDFFGGDTVGYIDIALG 278
           G+ LLEEAF K SKGKDFF GD +GY+DIALG
Sbjct: 133 GLMLLEEAFGKCSKGKDFFSGDRIGYLDIALG 164


>emb|CAN72996.1| hypothetical protein VITISV_003925 [Vitis vinifera]
          Length = 232

 Score =  118 bits (295), Expect = 1e-24
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +3

Query: 3   QYIDEAFTSGPSILPSDPYDRSVARFWGAYIDDKWFSSXXXXXXXXXXXXXXXXIEGVST 182
           QY+DEA++SGPSILPSDPYDR++ARFW AYIDDKWF S                ++ V  
Sbjct: 73  QYVDEAWSSGPSILPSDPYDRAIARFWAAYIDDKWFPSLSGLAKAQGEEAKKAAMDQVLE 132

Query: 183 GIELLEEAFEKISKGKDFFGGDTVGYIDIALG 278
           G  LLEEAF K SKGKDFFGGD +GY+DIA G
Sbjct: 133 GFLLLEEAFGKCSKGKDFFGGDRIGYLDIAWG 164


>emb|CBI32039.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  115 bits (287), Expect = 9e-24
 Identities = 55/92 (59%), Positives = 64/92 (69%)
 Frame = +3

Query: 3   QYIDEAFTSGPSILPSDPYDRSVARFWGAYIDDKWFSSXXXXXXXXXXXXXXXXIEGVST 182
           QYIDEA++S PSILPSDPYDR+VARFW AYIDDKWF                  ++ V  
Sbjct: 113 QYIDEAWSSAPSILPSDPYDRAVARFWAAYIDDKWFPWLNGVANAQGAEAKKAALDQVRE 172

Query: 183 GIELLEEAFEKISKGKDFFGGDTVGYIDIALG 278
           G+ +LEEAF K SKGKDFF GD +GY+DIALG
Sbjct: 173 GLVVLEEAFGKCSKGKDFFSGDRIGYVDIALG 204


Top