BLASTX nr result

ID: Coptis23_contig00000252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000252
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72399.1| hypothetical protein VITISV_041203 [Vitis vinifera]   232   9e-73
emb|CBI16573.3| unnamed protein product [Vitis vinifera]              232   7e-72
ref|XP_002285774.1| PREDICTED: uncharacterized protein LOC100262...   232   7e-72
ref|XP_002523386.1| conserved hypothetical protein [Ricinus comm...   221   6e-69
ref|XP_002299090.1| predicted protein [Populus trichocarpa] gi|2...   215   2e-65

>emb|CAN72399.1| hypothetical protein VITISV_041203 [Vitis vinifera]
          Length = 315

 Score =  232 bits (592), Expect(2) = 9e-73
 Identities = 120/202 (59%), Positives = 144/202 (71%)
 Frame = -2

Query: 1109 NFSMAFPYVSPSEEDKTMETSLISGFTESCGHDFGVDNIAFLESCSVDGADFPKLADMKA 930
            NFSMAFPYV+ SEE + ME SLISGFTE+CGHD GV N+AFLESCSV+G +F KLAD+ +
Sbjct: 116  NFSMAFPYVAVSEEKEAMENSLISGFTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHS 175

Query: 929  VHGYLTSVLKNKQNRKKHLIVLCSGGSASSEGLDPSWSEGDIFSELINSVEQSGASYSVL 750
            VH YL S  K +      L++ C GGS   E LD    E ++FSELI+S+EQSG  Y+VL
Sbjct: 176  VHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE-LDQR-LESEVFSELISSLEQSGTKYTVL 233

Query: 749  YASDPYKSLEYTSYRALDRFLAEGSAGNGSVSSSFCDGVCQIKSSFXXXXXXXXXXXXXX 570
            Y SDP++S++Y SYR L+RFLAEG+ GNGS +S+ CD VCQIKSS               
Sbjct: 234  YVSDPFRSIQYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIIL 293

Query: 569  XXXLCCMMGIDTPTRFEAPQDS 504
               LCCMMGIDTPTRFEAPQDS
Sbjct: 294  ISGLCCMMGIDTPTRFEAPQDS 315



 Score = 69.7 bits (169), Expect(2) = 9e-73
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = -1

Query: 1398 TAPAFLWSSQDGISDSGVDYRTISRNDLPKLILSQGGWSSLLCPRENLHNPLDIGLVFIA 1219
            T PAFLWS         V+Y+T+S  DL K ++S+GGWS+LLC  E    P+D+ LVF+ 
Sbjct: 27   TVPAFLWSHHQXEMKEAVNYQTLSPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 86

Query: 1218 RQLQS 1204
            R+L S
Sbjct: 87   RELSS 91


>emb|CBI16573.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  232 bits (592), Expect(2) = 7e-72
 Identities = 120/202 (59%), Positives = 144/202 (71%)
 Frame = -2

Query: 1109 NFSMAFPYVSPSEEDKTMETSLISGFTESCGHDFGVDNIAFLESCSVDGADFPKLADMKA 930
            NFSMAFPYV+ SEE + ME SLISGFTE+CGHD GV N+AFLESCSV+G +F KLAD+ +
Sbjct: 149  NFSMAFPYVAVSEEKEAMENSLISGFTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHS 208

Query: 929  VHGYLTSVLKNKQNRKKHLIVLCSGGSASSEGLDPSWSEGDIFSELINSVEQSGASYSVL 750
            VH YL S  K +      L++ C GGS   E LD    E ++FSELI+S+EQSG  Y+VL
Sbjct: 209  VHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE-LDQR-LESEVFSELISSLEQSGTKYTVL 266

Query: 749  YASDPYKSLEYTSYRALDRFLAEGSAGNGSVSSSFCDGVCQIKSSFXXXXXXXXXXXXXX 570
            Y SDP++S++Y SYR L+RFLAEG+ GNGS +S+ CD VCQIKSS               
Sbjct: 267  YVSDPFRSIQYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIIL 326

Query: 569  XXXLCCMMGIDTPTRFEAPQDS 504
               LCCMMGIDTPTRFEAPQDS
Sbjct: 327  ISGLCCMMGIDTPTRFEAPQDS 348



 Score = 66.6 bits (161), Expect(2) = 7e-72
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = -1

Query: 1398 TAPAFLWSSQDGISDSGVDYRTISRNDLPKLILSQGGWSSLLCPRENLHNPLDIGLVFIA 1219
            T PAFLWS         V+Y+T+   DL K ++S+GGWS+LLC  E    P+D+ LVF+ 
Sbjct: 60   TVPAFLWSHHQFEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 119

Query: 1218 RQLQS 1204
            R+L S
Sbjct: 120  RELSS 124


>ref|XP_002285774.1| PREDICTED: uncharacterized protein LOC100262157 [Vitis vinifera]
          Length = 315

 Score =  232 bits (592), Expect(2) = 7e-72
 Identities = 120/202 (59%), Positives = 144/202 (71%)
 Frame = -2

Query: 1109 NFSMAFPYVSPSEEDKTMETSLISGFTESCGHDFGVDNIAFLESCSVDGADFPKLADMKA 930
            NFSMAFPYV+ SEE + ME SLISGFTE+CGHD GV N+AFLESCSV+G +F KLAD+ +
Sbjct: 116  NFSMAFPYVAVSEEKEAMENSLISGFTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHS 175

Query: 929  VHGYLTSVLKNKQNRKKHLIVLCSGGSASSEGLDPSWSEGDIFSELINSVEQSGASYSVL 750
            VH YL S  K +      L++ C GGS   E LD    E ++FSELI+S+EQSG  Y+VL
Sbjct: 176  VHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE-LDQR-LESEVFSELISSLEQSGTKYTVL 233

Query: 749  YASDPYKSLEYTSYRALDRFLAEGSAGNGSVSSSFCDGVCQIKSSFXXXXXXXXXXXXXX 570
            Y SDP++S++Y SYR L+RFLAEG+ GNGS +S+ CD VCQIKSS               
Sbjct: 234  YVSDPFRSIQYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIIL 293

Query: 569  XXXLCCMMGIDTPTRFEAPQDS 504
               LCCMMGIDTPTRFEAPQDS
Sbjct: 294  ISGLCCMMGIDTPTRFEAPQDS 315



 Score = 66.6 bits (161), Expect(2) = 7e-72
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = -1

Query: 1398 TAPAFLWSSQDGISDSGVDYRTISRNDLPKLILSQGGWSSLLCPRENLHNPLDIGLVFIA 1219
            T PAFLWS         V+Y+T+   DL K ++S+GGWS+LLC  E    P+D+ LVF+ 
Sbjct: 27   TVPAFLWSHHQFEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 86

Query: 1218 RQLQS 1204
            R+L S
Sbjct: 87   RELSS 91


>ref|XP_002523386.1| conserved hypothetical protein [Ricinus communis]
            gi|223537336|gb|EEF38965.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 318

 Score =  221 bits (562), Expect(2) = 6e-69
 Identities = 114/202 (56%), Positives = 146/202 (72%)
 Frame = -2

Query: 1109 NFSMAFPYVSPSEEDKTMETSLISGFTESCGHDFGVDNIAFLESCSVDGADFPKLADMKA 930
            NFSMAFPY++ SEE+ TME SL+SGF ESCG D G++N+AF ESCSV+G +F KLAD+ A
Sbjct: 120  NFSMAFPYIAASEEE-TMENSLVSGFVESCGQDLGINNVAFSESCSVEGENFEKLADVHA 178

Query: 929  VHGYLTSVLKNKQNRKKHLIVLCSGGSASSEGLDPSWSEGDIFSELINSVEQSGASYSVL 750
            VH +L S ++ +QN +  L+V C  G+ S++GL+   SE +I SELI+SVE  G  Y VL
Sbjct: 179  VHDHLVSRMEKRQNGQADLVVFCH-GAHSAKGLEQPKSESEILSELISSVETLGVKYEVL 237

Query: 749  YASDPYKSLEYTSYRALDRFLAEGSAGNGSVSSSFCDGVCQIKSSFXXXXXXXXXXXXXX 570
            Y SDP++S++Y S+R L RFLAEGS GNGS++S+ CD VC+IKSS               
Sbjct: 238  YVSDPFRSIQYPSHRDLRRFLAEGSIGNGSLNST-CDEVCKIKSSLLEGVLVGIVLLIIL 296

Query: 569  XXXLCCMMGIDTPTRFEAPQDS 504
               LCCMMGIDTPTRFEAPQ+S
Sbjct: 297  ISGLCCMMGIDTPTRFEAPQES 318



 Score = 68.6 bits (166), Expect(2) = 6e-69
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = -1

Query: 1398 TAPAFLWSSQDGIS---DSGVDYRTISRNDLPKLILSQGGWSSLLCPRENLHNPLDIGLV 1228
            + PAF WSS    +   D  V+Y+TIS  DL + ILS+GGWS++LC  + L  P+D+ LV
Sbjct: 28   SVPAFFWSSHQFSNNGMDEAVNYQTISSRDLARSILSEGGWSNILCSEKKLQQPVDLALV 87

Query: 1227 FIARQLQS 1204
            F+ R+L S
Sbjct: 88   FVGRELLS 95


>ref|XP_002299090.1| predicted protein [Populus trichocarpa] gi|222846348|gb|EEE83895.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  215 bits (547), Expect(2) = 2e-65
 Identities = 110/202 (54%), Positives = 138/202 (68%)
 Frame = -2

Query: 1109 NFSMAFPYVSPSEEDKTMETSLISGFTESCGHDFGVDNIAFLESCSVDGADFPKLADMKA 930
            NFSMAF YV+ SEE   ME SL+SGF E+CG D  + N+AF ESCSV+G +F KLA++ A
Sbjct: 117  NFSMAFSYVAASEE--AMENSLVSGFAEACGQDLEISNVAFSESCSVEGENFQKLANLHA 174

Query: 929  VHGYLTSVLKNKQNRKKHLIVLCSGGSASSEGLDPSWSEGDIFSELINSVEQSGASYSVL 750
            ++ YL S ++ + +    L+V C GGS S +GLD   SE +IFSELI+SVE  G  YSVL
Sbjct: 175  INDYLASRMEKRPSGHTDLVVFCYGGSNSMKGLDQPQSESEIFSELISSVEMLGGKYSVL 234

Query: 749  YASDPYKSLEYTSYRALDRFLAEGSAGNGSVSSSFCDGVCQIKSSFXXXXXXXXXXXXXX 570
            Y SDP++S+    +R L+RFLAE +AGN S++S+ CD VCQIKSS               
Sbjct: 235  YVSDPFRSIHLPYHRELERFLAESAAGNASLNSTHCDEVCQIKSSLLEGVLVGIVLLIIL 294

Query: 569  XXXLCCMMGIDTPTRFEAPQDS 504
               LCCMMGIDTPTRFEAPQDS
Sbjct: 295  ISGLCCMMGIDTPTRFEAPQDS 316



 Score = 62.8 bits (151), Expect(2) = 2e-65
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = -1

Query: 1407 TSITAPAFLWSSQDGISDSG--VDYRTISRNDLPKLILSQGGWSSLLCPRENLHNPLDIG 1234
            +S T PAFLWS           V+Y+TIS  DL + +LS+GGWS+LLC  + +   +D+ 
Sbjct: 28   SSTTVPAFLWSPHHPHHQMSEVVNYQTISSKDLARSVLSEGGWSNLLCSEKKVQQSVDLA 87

Query: 1233 LVFIARQLQS 1204
            LVFI R L S
Sbjct: 88   LVFIGRGLLS 97


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