BLASTX nr result

ID: Coptis23_contig00000241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000241
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281188.1| PREDICTED: uncharacterized protein LOC100242...   271   4e-70
gb|AFK39739.1| unknown [Medicago truncatula]                          253   7e-65
ref|XP_003523771.1| PREDICTED: uncharacterized protein LOC100793...   251   5e-64
ref|XP_003550396.1| PREDICTED: uncharacterized protein LOC100800...   250   6e-64
ref|XP_002510437.1| ubiquitin-protein ligase, putative [Ricinus ...   249   1e-63

>ref|XP_002281188.1| PREDICTED: uncharacterized protein LOC100242078 [Vitis vinifera]
          Length = 443

 Score =  271 bits (692), Expect = 4e-70
 Identities = 171/377 (45%), Positives = 220/377 (58%), Gaps = 11/377 (2%)
 Frame = +2

Query: 371  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 541
            MGS CCV A++R  LP+R + E+L RNV +SP+W+  WDN+GRVA EV++ +   +H   
Sbjct: 1    MGSVCCVPAKER-ALPNRATGESLHRNVIYSPSWSFHWDNRGRVAGEVDNTSYGAAHAVS 59

Query: 542  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMVSGTDMCMRSSSL 715
              V  E K  L  E G+ S+  S   +  T    KS     T  +++++ +D+ M S+  
Sbjct: 60   RNVSLEMKGRLGHERGNFSDGGSLLDNFGTPTSQKSPVHEGTV-ANLMTPSDLSMESNHY 118

Query: 716  SEVKDLKESAAVADSSALILPVSIPVVXXXXXXXXXXXX-RCRPLPAEFTPSWKAHHSPG 892
            +EVK+L ES+ +AD SA  L  SIP               +  P+PA  TPS +A  SPG
Sbjct: 119  TEVKNLTESSEIADLSAPKLSFSIPSTSSFSTPTEDPLSSQTHPIPANSTPSRRARCSPG 178

Query: 893  YSFNLQRQVSDGQSSVFKSPNN-SISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFS 1063
            +   L RQVSD +    KSPNN S+S+ R S  +STCSNDLT               TFS
Sbjct: 179  HQ--LLRQVSDSRILGLKSPNNNSMSDRRPSFVLSTCSNDLT-NGSQGGSSDGWSMRTFS 235

Query: 1064 ELVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLQTCGVCLKLLMERSPWVAQK 1243
            ELVASSQRERWSFDSE   S RGK++ S+S    S S DLQ CG C KLL ERS + +QK
Sbjct: 236  ELVASSQRERWSFDSEHFGSGRGKISGSSSRFSCSPSIDLQNCGACSKLLTERSSFSSQK 295

Query: 1244 XXXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKG-KTIKIDI 1420
                          CGHVYHAECLE  T E +RFDP CPVC  G+KQ  K   K ++++ 
Sbjct: 296  IVPNNELSVVAVLVCGHVYHAECLETMTLEADRFDPACPVCMVGEKQVSKMSRKALRVEA 355

Query: 1421 DSKAR-NRISRNRVVDS 1468
            + KAR N+ISRNRVVDS
Sbjct: 356  ELKARNNKISRNRVVDS 372


>gb|AFK39739.1| unknown [Medicago truncatula]
          Length = 433

 Score =  253 bits (647), Expect = 7e-65
 Identities = 159/380 (41%), Positives = 215/380 (56%), Gaps = 9/380 (2%)
 Frame = +2

Query: 371  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 541
            MGS CCVAA+D+ L P+RT SE+  RN    P+ + +WD  GRVA E++D++   S    
Sbjct: 1    MGSVCCVAAKDQTL-PNRTGSESFHRNPVCLPSLSFQWDRWGRVASEIDDLSFRASRRVS 59

Query: 542  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMVSGTDMCMRSSSL 715
              V  E K SL  + G+LS+  S   +  T M  KS    Q G + M   +D+ M S+  
Sbjct: 60   RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 119

Query: 716  SEVKDLKESAAVADSSALILPVSIPVVXXXXXXXXXXXXRCRPLPAEFTPSWKAHHSPGY 895
            +  K+L ES  +A+SS   + +S+P                 P P   TPS  AH SPG+
Sbjct: 120  TVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNRHNL-PSP---TPSRWAHRSPGH 175

Query: 896  SFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFSEL 1069
               L RQ+SD +    KSP+NSISEGR S  +STCSND+ +              TFSEL
Sbjct: 176  P--LLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDM-IAGSQCGSSDGWSMRTFSEL 232

Query: 1070 VASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLQTCGVCLKLLMERSPWVAQKXX 1249
            VASSQ+ERWSFDSE   S R K++ ++S    S + DLQ+CG C KLL ER+ W +QK  
Sbjct: 233  VASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFI 292

Query: 1250 XXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQ-ALKKGKTIKIDIDS 1426
                        CGH YHAECLE  TSE + +DP CP+C  G+K  ++   K+++ + + 
Sbjct: 293  SNNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEM 352

Query: 1427 KARN-RISRNRVVDSNIHFD 1483
            KA+N +ISRNRVVDS  +FD
Sbjct: 353  KAKNYKISRNRVVDS--YFD 370


>ref|XP_003523771.1| PREDICTED: uncharacterized protein LOC100793040 [Glycine max]
          Length = 437

 Score =  251 bits (640), Expect = 5e-64
 Identities = 163/378 (43%), Positives = 210/378 (55%), Gaps = 10/378 (2%)
 Frame = +2

Query: 371  MGSACCVAARDRNL-LPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADS--- 538
            MGSACCVAA+D  +   SRT  E+L+RN   SP+W+ RWD+ GRVA E+ED +   S   
Sbjct: 1    MGSACCVAAKDHTIPSTSRTGGESLNRNAVCSPSWSFRWDSWGRVAGEIEDPSFHTSRRV 60

Query: 539  --HVGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMVSGTDMCMRSSS 712
              +V  E K SL  E G+LS+  S   +  T +  KS  R     S M   +D+ M S+ 
Sbjct: 61   SRNVSMELKGSLSSERGNLSDWGSTLDNSVTPLSLKSPVREHLVTSQMTPSSDLSMSSNC 120

Query: 713  LSEVKDLKESAAVADSSALILPVSIPVVXXXXXXXXXXXXRCRPLPAEFTPSWKAHHSPG 892
             + VK+L ES  +A+SS  I   S+P V                LP   TPS  AH SPG
Sbjct: 121  SAVVKNLIESPEIAESS--IPNRSVPSVFSIPTTDPMTNHNYHNLPNS-TPSRWAHCSPG 177

Query: 893  YSFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFSE 1066
            +   L  Q+SD +    KSP+NSISEGR S  +S CSND+                TFSE
Sbjct: 178  HP--LLTQISDSRILGLKSPDNSISEGRPSFVLSNCSNDMATGSQCGSSDGWSMR-TFSE 234

Query: 1067 LVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLQTCGVCLKLLMERSPWVAQKX 1246
            +VA SQ+ERWSFDSE   S R K++ ++S    S S DLQ+CG C KLL ERS W +QK 
Sbjct: 235  MVAPSQKERWSFDSEYSGSGRHKISGTSSRFSYSPSMDLQSCGACSKLLTERSAWGSQKF 294

Query: 1247 XXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKGKT-IKIDID 1423
                         CGHVYHAECLE  T E + +DP CP+C  G+K   K  K   + + +
Sbjct: 295  IASSDLSVVAVLVCGHVYHAECLETITPEADSYDPACPICMVGEKHMSKLSKKGFRTESE 354

Query: 1424 SKARN-RISRNRVVDSNI 1474
            +KA+N +ISRNRVVDS +
Sbjct: 355  TKAKNYKISRNRVVDSYV 372


>ref|XP_003550396.1| PREDICTED: uncharacterized protein LOC100800918 [Glycine max]
          Length = 434

 Score =  250 bits (639), Expect = 6e-64
 Identities = 164/376 (43%), Positives = 210/376 (55%), Gaps = 10/376 (2%)
 Frame = +2

Query: 371  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSHV-- 544
            MGSACCVAA+D NL P+RT  E+L R+V  SP+W+ +WD++GRVADE+E+ +   SHV  
Sbjct: 1    MGSACCVAAKDPNL-PNRTGDESLHRDVVCSPSWSFQWDSRGRVADEIENPSYHTSHVDS 59

Query: 545  ---GFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMVSGTDMCMRSSSL 715
                 E K SL  E G+LS+  S   +  T +  KS        + M   +D+ + S+  
Sbjct: 60   RNVSMELKGSLSSERGNLSDGGSILENSVTPISLKSPVDEALVANLMTPSSDLSVSSNFS 119

Query: 716  SEVKDLKESAAVADSSALILPVSIPVVXXXXXXXXXXXXRCRPLPAEFTPSWKAHHSPGY 895
            + VK+       A+SS   L  SIP V                LP   TP+  AH SP +
Sbjct: 120  TVVKN------PAESSIPNLSFSIPSVFSTPTADPLPNHNYHHLPNS-TPTRWAHRSPAH 172

Query: 896  SFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFSEL 1069
               L RQ+SD +    KSP+NSISEGR S  +STCSN++                TFSEL
Sbjct: 173  P--LLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSICGSSDGWSMR-TFSEL 229

Query: 1070 VASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLQTCGVCLKLLMERSPWVAQKXX 1249
            VASSQRERWSFDSE   S R K++ S+S    S S +LQ+CG C KLL ERS W  QK  
Sbjct: 230  VASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFI 289

Query: 1250 XXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALK--KGKTIKIDID 1423
                        CGH YHAECLE  TSE +R+DP CP+C  GDK   K    K ++ + +
Sbjct: 290  ANSDLSVVAVLVCGHSYHAECLEAMTSEADRYDPACPICMVGDKNLSKLLSRKGLRAESE 349

Query: 1424 SKARN-RISRNRVVDS 1468
             KA+N +ISRNRVVDS
Sbjct: 350  MKAKNHKISRNRVVDS 365


>ref|XP_002510437.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551138|gb|EEF52624.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 439

 Score =  249 bits (637), Expect = 1e-63
 Identities = 159/381 (41%), Positives = 208/381 (54%), Gaps = 10/381 (2%)
 Frame = +2

Query: 371  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 541
            MG+ACC+AAR+++L P+RT    L RN R SPTW+ RW+N+ RVA E+ED     SH   
Sbjct: 1    MGAACCIAARNKDL-PNRTGGNTLHRNARCSPTWSFRWENRRRVAGEIEDSLYQTSHGLS 59

Query: 542  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMVSGTDMCMRSSSL 715
              V  E K  L  + G+LS+  S      T +  KS    + G + +   + + + S+  
Sbjct: 60   RDVSVEVKGPLSSDRGNLSDEGSLHESFGTPISLKSPLHERIGANLIAQPSGLSLESNYP 119

Query: 716  SEVKDLKESAAVADSSALILPVSIPVVXXXXXXXXXXXXRCRPLPAEFTPSWKAHHSPGY 895
            +  K+  ES  + + SA  LP S+                  PLP   TPS +A  SPG+
Sbjct: 120  ALGKNSAESPDIVELSAPKLPYSVHSSFSTPSADPLPTGG-HPLPPNSTPSRRACRSPGH 178

Query: 896  SFNLQRQVSDGQSSVFKSPNN-SISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFSE 1066
               L RQ+SD +    KSPNN S+SEGR S  +STCS DLT+              TFSE
Sbjct: 179  --RLLRQISDSRILGLKSPNNYSLSEGRSSFVLSTCSQDLTMGSHGGSSDGWSMR-TFSE 235

Query: 1067 LVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLQTCGVCLKLLMERSPWVAQKX 1246
            LVASSQRERWSFDSE      GK +  +S    S S DLQTCG C K L E+S W +Q+ 
Sbjct: 236  LVASSQRERWSFDSEHFGYGFGKASGCSSRFSCSPSLDLQTCGACSKFLTEKSSWSSQRI 295

Query: 1247 XXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKG-KTIKIDID 1423
                         CGHVYHAECLE  T E +++DP CP+C  G+KQ  K   K +K + +
Sbjct: 296  LSNNELSVVSVLVCGHVYHAECLETMTLEVDKYDPACPICMGGEKQVSKMSKKALKAEAE 355

Query: 1424 SKAR-NRISRNRVVDSNIHFD 1483
             KAR ++ISRNRVVDS +  D
Sbjct: 356  LKARSHKISRNRVVDSYLDSD 376


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