BLASTX nr result

ID: Coptis23_contig00000235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000235
         (1525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273666.1| PREDICTED: uncharacterized protein LOC100244...   487   e-135
ref|XP_002527868.1| conserved hypothetical protein [Ricinus comm...   430   e-118
ref|XP_004137915.1| PREDICTED: uncharacterized protein LOC101220...   410   e-112
emb|CAN64199.1| hypothetical protein VITISV_014340 [Vitis vinifera]   380   e-103
ref|XP_002308203.1| predicted protein [Populus trichocarpa] gi|2...   343   5e-92

>ref|XP_002273666.1| PREDICTED: uncharacterized protein LOC100244343 [Vitis vinifera]
          Length = 497

 Score =  487 bits (1254), Expect = e-135
 Identities = 279/525 (53%), Positives = 322/525 (61%), Gaps = 18/525 (3%)
 Frame = -3

Query: 1523 GGGGG------EIVTVACPDHLVLADLPVAKXXXXXXXXXXXXXXXXXXTVKIVGRRSRR 1362
            G G G      E VTVACPDHLVLADLPVAK                   VK VGRRSRR
Sbjct: 13   GSGSGSKPLPVETVTVACPDHLVLADLPVAKSLGSMTAASL---------VKTVGRRSRR 63

Query: 1361 HLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSSCYLCDERIQKIQTIKMMEGIF 1182
             LGERVHFCVRCDFPIAIYGRL PCEHAFCLDCARSDS CYLCDERIQKIQTIKMMEGIF
Sbjct: 64   QLGERVHFCVRCDFPIAIYGRLIPCEHAFCLDCARSDSICYLCDERIQKIQTIKMMEGIF 123

Query: 1181 ICAAPHCLKSFLKKSEFETHIHETHADLLQSNIEKEDGNESDTFNMPRPSSMDFTMSRAS 1002
            ICAAPHCLKSFLK++EFE+HIHE+HADLLQ N EKEDGNES+  ++              
Sbjct: 124  ICAAPHCLKSFLKRAEFESHIHESHADLLQPNAEKEDGNESEALSV-------------- 169

Query: 1001 SIDAHAKQSIAADSSTACTPARTAFSPNSNSQPHDLDDRTRRSQPRDXXXXXXXXXXXXX 822
                  KQS  +D STA  P+R  FSP+S+SQ HD +D+ RR QPR+             
Sbjct: 170  ------KQSTVSD-STARAPSRPVFSPSSSSQLHDREDKARRQQPRE-----QQPPSRPI 217

Query: 821  XXXXXXXXXXXPDLQSE-NKPSPVFDRAGPYNRFHNQQNFDMQAGPHQRRDSDQNPDKQQ 645
                        +LQ + N+P   FDR G  +RFH  Q FD Q G  Q  +S Q  DKQQ
Sbjct: 218  IQPKPPPFFHPSELQPDNNRPPQGFDRPG-LHRFH-PQTFDNQGGLQQ--ESAQFSDKQQ 273

Query: 644  GIISELPSSEYLQ-HPLQQPNFVVPVNTNQRLAPPAYNFSPFPAEGAHMFYNARYEAMRP 468
            GI+SE P +EY   H  Q PNF VP+N N  L PP +N+  FP+EGA  FY++ +E  RP
Sbjct: 274  GILSESPYAEYPPLHSHQPPNFAVPLNPNPLLTPPPFNYHHFPSEGAQTFYSSPHEMARP 333

Query: 467  DMPSESGREQGSLLGFPPAPAGDVTSSDSYPRPWNMGAV-MPFEQMPAGQGMSESYANQL 291
            D   + G EQGSLLGFPP P G V   +SYPRPWN G V +PFE    GQ + +   N  
Sbjct: 334  DSAPDVGTEQGSLLGFPPGPVGGVNFPESYPRPWNSGPVGVPFEGPTGGQPIPDGLGNAS 393

Query: 290  DAQGRATLFQGDYGQVPGVI---PPTPPMGNMGSEPLQGSSSSDNRDGKGVLA-----XX 135
            D QGR   FQGDYG+ PG +   PP PP+ N G EP QGS++ D RDGKG+LA       
Sbjct: 394  DPQGRGAFFQGDYGRNPGSLPSNPPLPPLANKGMEPTQGSAAMDPRDGKGILAQPPLPLP 453

Query: 134  XXXXXXRHLSQFTRGNFPHPGDAASQEGPSYGW-QEKHDGYGGSQ 3
                   HLSQ  R  F   GD  S++G  +GW QEKHD +G  Q
Sbjct: 454  PPPPPPPHLSQLKRAKF-FSGD-TSRDGQGFGWQQEKHDSFGSGQ 496


>ref|XP_002527868.1| conserved hypothetical protein [Ricinus communis]
            gi|223532719|gb|EEF34499.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 484

 Score =  430 bits (1106), Expect = e-118
 Identities = 258/527 (48%), Positives = 300/527 (56%), Gaps = 20/527 (3%)
 Frame = -3

Query: 1523 GGGGG------EIVTVACPDHLVLADLPVAKXXXXXXXXXXXXXXXXXXTVKIVGRRSRR 1362
            GGGG       + VTVACPDHLVLADLPVAK                   VK  GRRSRR
Sbjct: 13   GGGGAAKPLPVDTVTVACPDHLVLADLPVAKGIGAATAATL---------VKTAGRRSRR 63

Query: 1361 HLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSSCYLCDERIQKIQTIKMMEGIF 1182
             LGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDS CYLCDERIQKIQTIK+MEGIF
Sbjct: 64   QLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKIMEGIF 123

Query: 1181 ICAAPHCLKSFLKKSEFETHIHETHADLLQSNIEKEDGNESDTFNMPRPSSMDFTMSRAS 1002
            ICAAPHCLKSFLK+++FE+HI E+HADLLQ N EKE+GN+++                  
Sbjct: 124  ICAAPHCLKSFLKRTDFESHIQESHADLLQPNAEKENGNDTEV----------------- 166

Query: 1001 SIDAHAKQSIAADSSTACTPARTAFSPNSNSQPHDLDDRTRRSQPRDXXXXXXXXXXXXX 822
                 AKQ   +D STA  P R   SP SNS   D +D+ RR Q R+             
Sbjct: 167  ---QSAKQYSVSD-STARAPTRPLISPGSNSL--DSEDKARRQQSRE--QPLARPMMQPR 218

Query: 821  XXXXXXXXXXXPDLQSENKPSPVFDRAGPYNRFHNQQNFDMQAGPHQRRDSDQNPDKQQG 642
                        D Q +N   P FDR G  N F       MQ GP Q        ++QQG
Sbjct: 219  PPFFGQGQNYPSDPQPDNSRPPGFDRPGIQNHFQQ----SMQGGPPQ--------EQQQG 266

Query: 641  IISELPSSEY-LQHPLQQPNFVVPVNTNQRLAPPAYNFSPFPAEGAHMFYNARYE---AM 474
            I+SE P  EY   HP+Q PNFV+P+N+N  L  P Y   PF  EGA  FY A YE     
Sbjct: 267  ILSETPMPEYPAMHPIQPPNFVIPINSNP-LMTPQYGLPPFQPEGAQPFYGAPYEMGQMA 325

Query: 473  RPDMPSESGREQGSLLGFPPAPAGDVTSSDSYPRPWNMGAVMPFEQMPAGQGMSESYANQ 294
            RPD  SE G EQGSLLGFPP PAG V    +Y +PWNMG          GQGM + + N 
Sbjct: 326  RPDATSEIGAEQGSLLGFPPGPAG-VNFMSNYSQPWNMGPA------AGGQGMPDGFPNL 378

Query: 293  LDAQGRATLFQGDYGQVPGVI---PPTPPMGNMGSEPLQGSSSSDNRDGKGVLA------ 141
             D++G A  +QG+YG+ PGV+   PP PP  N G E +QG ++ D RD KG+LA      
Sbjct: 379  SDSRGNAAFYQGEYGRNPGVLPMMPPPPPSANKGMEAVQGGNAMDARDSKGILAPQPFPH 438

Query: 140  XXXXXXXXRHLSQFTRGNFPHPGDAASQEGPSYGWQ-EKHDGYGGSQ 3
                     H SQ  RG + + GD    +G S+GWQ E  DG+G  Q
Sbjct: 439  PPPPPPPLPHSSQPKRGKY-YSGD-MGHDGQSFGWQHENRDGFGSGQ 483


>ref|XP_004137915.1| PREDICTED: uncharacterized protein LOC101220422 [Cucumis sativus]
            gi|449483687|ref|XP_004156660.1| PREDICTED:
            uncharacterized protein LOC101227330 [Cucumis sativus]
          Length = 471

 Score =  410 bits (1054), Expect = e-112
 Identities = 246/524 (46%), Positives = 289/524 (55%), Gaps = 17/524 (3%)
 Frame = -3

Query: 1523 GGGG-----GEIVTVACPDHLVLADLPVAKXXXXXXXXXXXXXXXXXXTVKIVGRRSRRH 1359
            GGG       E VTVACPDHLVLADLPVAK                   VK VGRRSRR 
Sbjct: 15   GGGAVKPLPAETVTVACPDHLVLADLPVAKGIGAATAASI---------VKSVGRRSRRQ 65

Query: 1358 LGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSSCYLCDERIQKIQTIKMMEGIFI 1179
            LGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDS CYLCD+RIQKIQTIK+MEGIFI
Sbjct: 66   LGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKLMEGIFI 125

Query: 1178 CAAPHCLKSFLKKSEFETHIHETHADLLQSNIEKEDGNESDTFNMPRPSSMDFTMSRASS 999
            CAAPHCLKSFLK+SEFE+HIHE HADLL+ N +KEDGNE                     
Sbjct: 126  CAAPHCLKSFLKRSEFESHIHENHADLLKPNADKEDGNE--------------------- 164

Query: 998  IDAHAKQSIAADSSTACTPARTAFSPNSNSQPHDLDDRTRRSQPRDXXXXXXXXXXXXXX 819
            I+A++ +   A  ST   P R   SP SNSQP + D++  R Q RD              
Sbjct: 165  IEANSAKQSTASESTVRGPLRPLISPGSNSQPQERDEKFHRQQSRD---QPRSGMQQKQT 221

Query: 818  XXXXXXXXXXPDLQSENKPSPVFDRAGPYNRFHNQQNFDMQAGPHQRRDSDQNPDKQQGI 639
                       + Q ++  S  FDR GP+ RF   QNFD Q  PHQ  DS Q P+KQQGI
Sbjct: 222  PSFGQNQNNTSESQQDSGHSQGFDRHGPHGRF-PPQNFDAQGAPHQ--DSSQFPEKQQGI 278

Query: 638  ISELPSSEYLQ-HPLQQPNFVVPVNTNQRLAPP-AYNFSPFPAEGAHMFYNARYEAMRPD 465
            +S+ P S+Y    P+  PN+VVP N+N  L PP  + + PFP EGA  +YN  YE  R D
Sbjct: 279  LSDTPYSQYPPLQPIPPPNYVVPANSNPMLTPPLPFGYPPFPIEGAQQYYNTPYEVSRQD 338

Query: 464  MPSESGREQGSLLGFPPAPAGDVTSSDSYPRPWNMG-AVMPFEQMPAGQGMSESYANQLD 288
              +E+G EQGSLLGFPP  AG +  S +YP+ WN   A +P+E    G            
Sbjct: 339  TAAETGSEQGSLLGFPPGAAGGMNFSATYPQSWNTAQAGIPYEHAGGG------------ 386

Query: 287  AQGRATLFQGDYGQVPGVIPPTPPMGNMGSEPLQGSSSSDNRDGKGVLA------XXXXX 126
                    QGDY + PG +P     GN          + D RDGKG+LA           
Sbjct: 387  --------QGDYRRSPGRMPVNSSAGN----------AMDIRDGKGILAPQPLIQLPPPP 428

Query: 125  XXXRHLSQFTRGNFPHPGDAASQEGPSYGWQ---EKHDGYGGSQ 3
                ++S   RG F + GD    +G S GWQ      D +G  Q
Sbjct: 429  PPPPYMSHNKRGKF-YSGD-MDHDGQSLGWQNDSHSRDSFGSGQ 470


>emb|CAN64199.1| hypothetical protein VITISV_014340 [Vitis vinifera]
          Length = 380

 Score =  380 bits (976), Expect = e-103
 Identities = 210/396 (53%), Positives = 241/396 (60%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1523 GGGGG------EIVTVACPDHLVLADLPVAKXXXXXXXXXXXXXXXXXXTVKIVGRRSRR 1362
            G G G      E VTVACPDHLVLADLPVAK                   VK VGRRSRR
Sbjct: 13   GSGSGSKPLPVETVTVACPDHLVLADLPVAKSLGSMTAASL---------VKTVGRRSRR 63

Query: 1361 HLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSSCYLCDERIQKIQTIKMMEGIF 1182
             LGERVHFCVRCDFPIAIYGRL PCEHAFCLDCARSDS CYLCDERIQKIQTIKMMEGIF
Sbjct: 64   QLGERVHFCVRCDFPIAIYGRLIPCEHAFCLDCARSDSICYLCDERIQKIQTIKMMEGIF 123

Query: 1181 ICAAPHCLKSFLKKSEFETHIHETHADLLQSNIEKEDGNESDTFNMPRPSSMDFTMSRAS 1002
            ICAAPHCLKSFLK++EFE+HIHE+HADLLQ N EKEDGNES+  ++              
Sbjct: 124  ICAAPHCLKSFLKRAEFESHIHESHADLLQPNAEKEDGNESEALSV-------------- 169

Query: 1001 SIDAHAKQSIAADSSTACTPARTAFSPNSNSQPHDLDDRTRRSQPRDXXXXXXXXXXXXX 822
                  KQS  +D STA  P+R  FSP+S+SQ HD +D+ RR QPR+             
Sbjct: 170  ------KQSTVSD-STARAPSRPVFSPSSSSQLHDREDKARRQQPRE------------- 209

Query: 821  XXXXXXXXXXXPDLQSENKPSPVFDRAGPYNRFHNQQNFDMQAGPHQRRDSDQNPDKQQG 642
                            +  PS    +  P   FH     ++Q   ++       PDKQQG
Sbjct: 210  ----------------QQPPSRPIIQPKPPXFFHPS---ELQPDNNRPPQGFDRPDKQQG 250

Query: 641  IISELPSSEYLQ-HPLQQPNFVVPVNTNQRLAPPAYNFSPFPAEGAHMFYNARYEAMRPD 465
            I+SE P +EY   H  Q PNF VP+N N  L PP +N+  FP+EGA  FY++ +E  RPD
Sbjct: 251  ILSESPYAEYPPLHSHQPPNFAVPLNPNPLLTPPPFNYHHFPSEGAQTFYSSPHEMARPD 310

Query: 464  MPSESGREQGSLLGFPPAPAGDVTSSDSYPRPWNMG 357
               + G EQGSLLGFPP P G V   +SYPRPWN G
Sbjct: 311  SAPDVGTEQGSLLGFPPGPVGGVNFPESYPRPWNSG 346


>ref|XP_002308203.1| predicted protein [Populus trichocarpa] gi|222854179|gb|EEE91726.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  343 bits (881), Expect = 5e-92
 Identities = 198/388 (51%), Positives = 222/388 (57%), Gaps = 4/388 (1%)
 Frame = -3

Query: 1508 EIVTVACPDHLVLADLPVAKXXXXXXXXXXXXXXXXXXTVKIVGRRSRRHLGERVHFCVR 1329
            E VTVACPDHLVLADLPVAK                   VK VGRRSRR LGERVHFCVR
Sbjct: 6    ETVTVACPDHLVLADLPVAKGIGSATAATI---------VKTVGRRSRRQLGERVHFCVR 56

Query: 1328 CDFPIAIYGRLSPCEHAFCLDCARSDSSCYLCDERIQKIQTIKMMEGIFICAAPHCLKSF 1149
            CDFPIAIYGRLSPCEHAFCLDCARSDS CYLCDERIQKIQTIKMMEGIFICAAPHCLKSF
Sbjct: 57   CDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKMMEGIFICAAPHCLKSF 116

Query: 1148 LKKSEFETHIHETHADLLQSNIEKEDGNESDTFNMPRPSSMDFTMSRASSIDAHAKQSIA 969
            LK SEFE HIH++HADLLQ N  K++GNE +  +  +P++ D                  
Sbjct: 117  LKSSEFEAHIHDSHADLLQPNAVKDEGNEYEVQSTKQPTASD------------------ 158

Query: 968  ADSSTACTPARTAFSPNSNSQPHDLDDRTRRSQPRDXXXXXXXXXXXXXXXXXXXXXXXX 789
               ST   P R   SP S+SQ  D +D+ RR QPR+                        
Sbjct: 159  ---STVRAPPRPVISPGSSSQLLDFEDKARRQQPRE----PLQRPMMSKPPYFGQAQNYL 211

Query: 788  PDLQSENKPSPVFDRAGPYNRFHNQQNFDMQAGPHQRRDSDQNPDKQQGIISELPSSEY- 612
             + Q  N   P FDR G       QQN                  KQQG++SE P  EY 
Sbjct: 212  LEPQLNNNHPPGFDRPG-------QQN------------------KQQGMVSETPMPEYP 246

Query: 611  LQHPLQQPNFVVPVNTNQRLAPPAYNFSPFPAEGAHMFYNARYE---AMRPDMPSESGRE 441
              H +Q PNFVVP+N+N  L  P +   PF  EGA  FY A YE     RPD   + G E
Sbjct: 247  PMHSIQPPNFVVPMNSNP-LLTPQFGLPPFQTEGAQPFYVAPYEMGQMARPDSAPDGGAE 305

Query: 440  QGSLLGFPPAPAGDVTSSDSYPRPWNMG 357
            QGSLLGFPP PAG +    +Y +PWN G
Sbjct: 306  QGSLLGFPPGPAGGMNFMANYSQPWNSG 333


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