BLASTX nr result

ID: Coptis23_contig00000232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000232
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-lik...   124   5e-26
ref|XP_003541767.1| PREDICTED: uncharacterized protein LOC100807...   114   7e-23
ref|XP_003547113.1| PREDICTED: uncharacterized protein LOC100791...   109   1e-21
ref|XP_002518574.1| transcription regulator, putative [Ricinus c...   101   5e-19
ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-lik...    96   2e-17

>ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 414

 Score =  124 bits (311), Expect = 5e-26
 Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 5/240 (2%)
 Frame = -3

Query: 999 DDGKRLFQRVWSDEDEY-VIXXXXXXXXXXXMDPSAPSNSTALFEYIKDSLSIKDVYKSQ 823
           D+ K+LFQR+WS++DE  ++            DPS   N  A  ++IK SL + DV K+Q
Sbjct: 176 DESKKLFQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMN--AFHDFIKKSLHV-DVTKAQ 232

Query: 822 LISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEGKSVMTDVAKKS 643
           L+ KIR LK+K+ N A R K G DP  SK HD K ++ +K++WG E   ++   D  K +
Sbjct: 233 LMDKIRRLKKKYRNNADRGKKGADPTFSKAHDQKGFELSKRIWGGEGFLRTPAVDQLKPN 292

Query: 642 KNTKSVNNGVEFT----PNLKVFTLPSSSPVVVAQNVEGNGNVEYPYLNESVQLRNYSIV 475
            N     N    T     +LK   LPS         ++ + + E P       +     +
Sbjct: 293 ANGTPKKNQRGSTSKALASLKAELLPSPDAPKEDDKMKVD-DCEVPSGCMDGFVAFERSL 351

Query: 474 PMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLERIDLVRDQTKVMLDALDS 295
              GL E F K G + IG S   +L + WK L  AE +L+L+R +L+RDQTK++LDA  S
Sbjct: 352 GAVGLPESFLKPGLELIGQSKRTELEEEWKKLHLAELELFLKRTELIRDQTKLILDAYKS 411


>ref|XP_003541767.1| PREDICTED: uncharacterized protein LOC100807745 [Glycine max]
          Length = 448

 Score =  114 bits (284), Expect = 7e-23
 Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 19/253 (7%)
 Frame = -3

Query: 996 DGKRLFQRVWSDEDEY-VIXXXXXXXXXXXMDPSAPSNSTALFEYIKDSLSIKDVYKSQL 820
           D  + FQR+WS+EDE  ++           +DP    N+ A  +++K SL + +V  +QL
Sbjct: 196 DNSKKFQRLWSEEDELAIVKGVVEFTSKTGLDPLKFPNTNAFHDFVKKSLHV-EVSCNQL 254

Query: 819 ISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEV-------------E 679
             K+R LK+KF   A + KNGE P+ SKPHD K ++ +KKVWG EV              
Sbjct: 255 KEKVRRLKKKFETQAGKGKNGEAPKFSKPHDQKFFELSKKVWGREVTAGANGGPVEKPKS 314

Query: 678 GKSVMTDVAKKSKNTKSVNNGVEFTPNLK-----VFTLPSSSPVVVAQNVEGNGNVEYPY 514
             S +    KK   +++V +  +  P  K     V +L       +  N + +G     +
Sbjct: 315 NGSAVKSPKKKESGSRNVASAKKPKPESKPEPVPVLSLEYKDSEKMQINQKPDGGDASLF 374

Query: 513 LNESVQLRNYSIVPMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLERIDLV 334
           L E  + +  + +    L E   KRG + IG S   +L  +WK L  AE +L+  R +L+
Sbjct: 375 LRELARSKEGASICK--LDEDDVKRGLELIGESKRAELRGKWKKLHLAEMELFANRSELI 432

Query: 333 RDQTKVMLDALDS 295
            +QTK++L+AL +
Sbjct: 433 GEQTKLILEALQA 445


>ref|XP_003547113.1| PREDICTED: uncharacterized protein LOC100791520 [Glycine max]
          Length = 437

 Score =  109 bits (273), Expect = 1e-21
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 20/254 (7%)
 Frame = -3

Query: 996 DGKRLFQRVWSDEDEY-VIXXXXXXXXXXXMDPSAPSNSTALFEYIKDSLSIKDVYKSQL 820
           D  + FQR+WS+EDE  ++           +DP    N+ A  +++K SL + +   +QL
Sbjct: 184 DNSKKFQRLWSEEDELAILKGVVEFTSKTGLDPLKFPNANAFHDFMKKSLHV-EFSSNQL 242

Query: 819 ISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEG-------KSVMT 661
             K+R LK+KF   A + KNG+ P+ SKPHD K ++ +KK WG E  G       K    
Sbjct: 243 KEKLRRLKKKFETQAGKGKNGDAPKFSKPHDQKFFELSKKAWGSEDGGVANGSVEKPKSN 302

Query: 660 DVAKKSKNTKSVNNG---VEFTPNLKVFTLPSSSPVVVAQNVEG---------NGNVEYP 517
             A KS N K   +G   V      K  T P  +PV   +  E          +G     
Sbjct: 303 GNAAKSPNPKKKESGSRNVASAKKPKPETNPEPAPVPSLEFKESERMEIDQKPDGGDACL 362

Query: 516 YLNESVQLRNYSIVPMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLERIDL 337
           +L E V+ +  + V    L E   KRG + I  S   +L  +WK L  AE +L+  R +L
Sbjct: 363 FLRELVRYKEGANV--SRLDEDDVKRGLELIEESKRAELRGKWKKLHHAEMELFANRSEL 420

Query: 336 VRDQTKVMLDALDS 295
           + +QTK++L+AL S
Sbjct: 421 IGEQTKLILEALRS 434


>ref|XP_002518574.1| transcription regulator, putative [Ricinus communis]
           gi|223542419|gb|EEF43961.1| transcription regulator,
           putative [Ricinus communis]
          Length = 391

 Score =  101 bits (251), Expect = 5e-19
 Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 2/232 (0%)
 Frame = -3

Query: 999 DDGKRLFQRVWSDEDEYVIXXXXXXXXXXXM-DPSAPSNSTALFEYIKDSLSIKDVYKSQ 823
           D  K+LFQR+WS++DE V+             DP+   +  + F+YIK SL   DV  +Q
Sbjct: 162 DTKKQLFQRLWSEDDEIVVLKGIIDFIEKKGVDPA--KDIISFFDYIKKSLHF-DVSLNQ 218

Query: 822 LISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWG-DEVEGKSVMTDVAKK 646
           L  KI  LK+KF N  K  K GED   SK HD K +  +KK+WG D + G S  + +   
Sbjct: 219 LKDKIWRLKKKFENNVK-GKKGEDKTFSKSHDQKSFDLSKKIWGTDGIIGASD-SSIKPN 276

Query: 645 SKNTKSVNNGVEFTPNLKVFTLPSSSPVVVAQNVEGNGNVEYPYLNESVQLRNYSIVPMQ 466
            K  K+ NN  +      +  L +   + V +  E    ++    N S   +    V + 
Sbjct: 277 GKAKKATNNNAK-----SLVALKAELGMDVDKENEKVDKMDVELENHSSLKQFDRGVGVS 331

Query: 465 GLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLERIDLVRDQTKVML 310
           G+ +   KRG D +  +   ++ ++W+ L  AE +L+L R +L R+Q K+ML
Sbjct: 332 GMEDYVIKRGLDMVQGAKKAEMEEKWRKLHVAELELFLRRNELTREQAKLML 383


>ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-like, partial [Cucumis
           sativus]
          Length = 261

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 6/219 (2%)
 Frame = -3

Query: 975 RVWSDEDEY-VIXXXXXXXXXXXMDPSAPSNSTALFEYIKDSLSIKDVYKSQLISKIRTL 799
           R+WS++DE  ++            DP    N     ++IK++LS+ DV K+QLI K+R L
Sbjct: 40  RLWSEDDEISILQGMIDFELAKGSDPYTDMNQ--FLDFIKENLSV-DVSKNQLIDKVRRL 96

Query: 798 KRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEGKSVMTDVAKKSKNTKSVNN 619
           K+K+ N +++ +NG+DP   K H+ K +  +KK+WG+E + K     V  K+ N+ S++ 
Sbjct: 97  KKKYKNNSEKGRNGDDPVFLKQHEHKSFVLSKKIWGNEAKKKPRKQSV--KASNSVSIS- 153

Query: 618 GVEFTPNLKVFTLPSSSPVVVAQNVEG-----NGNVEYPYLNESVQLRNYSIVPMQGLGE 454
               +P + V        +V   NVE          EYP+L  S  + N        L  
Sbjct: 154 ----SPRVDV-EARKLKEIVNNNNVESKILPEEFLSEYPWLKASFLIENDKFRSEVVLR- 207

Query: 453 VFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLERIDL 337
            F +     IGS  AK+L+ +W+ L  +E +LY++++DL
Sbjct: 208 -FVRERMPLIGSEKAKELDDKWRKLGESEMELYMKKVDL 245


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