BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000224
         (3499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like...  1118   0.0  
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...  1066   0.0  
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...  1061   0.0  
ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricin...  1043   0.0  
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid...  1026   0.0  

>ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
          Length = 989

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 561/801 (70%), Positives = 644/801 (80%), Gaps = 2/801 (0%)
 Frame = +2

Query: 686  GWKAPPKKRGRKGEIRPPLMWENLEDEYSEWIDEHETENTDWDFAREEVTEAVEASKDLT 865
            G K   KKR + G+++P LMWE  E+E+ +WID + TE+ D D   E V+E  +A  DL 
Sbjct: 220  GSKKNDKKRKKSGDLKPTLMWEIWEEEHDKWIDMNLTEDVDLDHQNELVSETADAPSDLI 279

Query: 866  LPLLRYQKEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXM 1045
            +PLLRYQKEWLAWA+KQEES ++GGILADEMGMGKTIQAIALVL+KR IS+         
Sbjct: 280  MPLLRYQKEWLAWALKQEESTTRGGILADEMGMGKTIQAIALVLSKREISQKI------- 332

Query: 1046 PLFGSEGEQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDY 1225
                          TLVICPVVAVLQWVNEI + TV+GSTKVLVYHGANR KS  QFS+Y
Sbjct: 333  -------------CTLVICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEY 379

Query: 1226 DFVITTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQAR 1405
            DFVITTYSIVEAEYRKNVMPPK+KCV+C KLF P KM+ HLRYFCGPDA+KTDKQSKQ +
Sbjct: 380  DFVITTYSIVEAEYRKNVMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKK 439

Query: 1406 KKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVVEEF 1585
            K+    LK S+      S +      EG   ++   K                   +E  
Sbjct: 440  KEPKLELKISD------SVEDNGGECEGEKRKKDQPK---PRKNYKPKKHMGFGPSIENS 490

Query: 1586 ETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQ 1765
              +E    +R   SILHS++W+RIILDEAH+IKDRRS+TA+AVLALES YKWALSGTPLQ
Sbjct: 491  AVDEQSTSTR--KSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKWALSGTPLQ 548

Query: 1766 NRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATP 1945
            NRVGELYSL+RFL+I PYSYY C+DCDC+ LDYSS+++CPNC HKSVRHFCWWNK++ATP
Sbjct: 549  NRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATP 608

Query: 1946 IQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIITMRRDTLDVKEEDYY 2125
            IQ   +  +G+RAMILLKHK+LKSI+LRRTKKGRA+DLALPPRI+++RRDTLD+KEEDYY
Sbjct: 609  IQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYY 668

Query: 2126 ESLYSDSQLQFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQN--NT 2299
            +SLY++SQ QFNTY+EAGTLMNNYAHIFDLLTRLRQAVDHPYLV+YS ++  R+ N  +T
Sbjct: 669  QSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDT 728

Query: 2300 YISEQECGICHDPAEDPVVTSCEHIFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNP 2479
               EQ CGIC+DP EDPVVTSC H+FCKACL D++  LGQVSCPSCSKPLT D T  ++P
Sbjct: 729  ENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDP 788

Query: 2480 GDMRTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSF 2659
            GD   KTTIKG++ SSILNRI L +FQTSTKIDALREEIRFMVERDG+AKGIVFSQFTSF
Sbjct: 789  GDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSF 848

Query: 2660 LDLINYSLQKSGIQCVQLVGSMTMTARDVAIRRFTEDPECKIFLMSLKAGGVALNLTVAS 2839
            LDLINYSLQKSGI CVQLVGSM+M ARD AI RFT +P+CKIFLMSLKAGGVALNLTVAS
Sbjct: 849  LDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVAS 908

Query: 2840 HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTV 3019
            HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IE TIEERILKLQ+KKELVFEGTV
Sbjct: 909  HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTV 968

Query: 3020 GGSSEALIKLTEADLRFLFAT 3082
            GGSSEAL KLTEADL+FLF T
Sbjct: 969  GGSSEALGKLTEADLKFLFIT 989


>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 537/803 (66%), Positives = 627/803 (78%), Gaps = 11/803 (1%)
 Frame = +2

Query: 707  KRGRKGEIRPPLMWENLEDEYSEWIDEHETENTDWDFAREEVTEAVEASKDLTLPLLRYQ 886
            ++GRKG+ +  L+W   E+E  +WID H  E+ D D   E + E  +   DLT+PLLRYQ
Sbjct: 163  RKGRKGDSKSVLLWNAWEEEQEKWIDRHMLEDVDLDNHSEVMNETADIPSDLTMPLLRYQ 222

Query: 887  KEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEG 1066
            KEWLAWA+KQE S SKGGILADEMGMGKT+QAIALVLAKR                G E 
Sbjct: 223  KEWLAWALKQESSASKGGILADEMGMGKTVQAIALVLAKREFE------------LGCEP 270

Query: 1067 EQS---------TIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFS 1219
            +QS          IK TLVICPVVAV QWV+E+ + T++GSTKVL+YHGANR +S  +F+
Sbjct: 271  DQSIPCSSSLKPAIKGTLVICPVVAVTQWVSEVDRFTLKGSTKVLIYHGANRGRSGNRFA 330

Query: 1220 DYDFVITTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQ 1399
            DYDFVITTYS+VE+EYRK+++PPKE+C +CGKLF+P K+  H  YFCGPDAV+T+KQSKQ
Sbjct: 331  DYDFVITTYSVVESEYRKHMLPPKERCPYCGKLFLPNKLMYHQIYFCGPDAVRTEKQSKQ 390

Query: 1400 ARKKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVVE 1579
            A+KK+    K    KTK + + +   S    +EE       W                  
Sbjct: 391  AKKKKREVTKG---KTKKSDSKISKSSNTKKEEE------MW------------------ 423

Query: 1580 EFETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTP 1759
              + E++    R   SILH+++W RIILDEAHYIK R  +TA+AVLALES+YKWALSGTP
Sbjct: 424  -MDEEDLDAPVRSDRSILHAVKWQRIILDEAHYIKSRHCNTAKAVLALESTYKWALSGTP 482

Query: 1760 LQNRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIA 1939
            LQNRVGELYSL+RFLQITPYSYY C+DCDC+ LD+S T +C  C H SVRHFCWWNK++A
Sbjct: 483  LQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHS-TKECSVCTHSSVRHFCWWNKYVA 541

Query: 1940 TPIQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIITMRRDTLDVKEED 2119
            TPIQ   +   GKRAMILLKHK+LK+IVLRRTK GRA+DLALPPRI+++RRD LD+KE+D
Sbjct: 542  TPIQSYGNGDAGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQD 601

Query: 2120 YYESLYSDSQLQFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQ--N 2293
            YYESLY++SQ QFNTYIEA TLMNNYAHIFDLLTRLRQAVDHPYLV+YS SA SRS   +
Sbjct: 602  YYESLYNESQAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAASRSGVLS 661

Query: 2294 NTYISEQECGICHDPAEDPVVTSCEHIFCKACLTDYAAALGQVSCPSCSKPLTADFTAKV 2473
            N    EQ CGICH+P ED VVTSCEH FCKACL D++++LG+VSCP+CSK LT D T+  
Sbjct: 662  NNVTVEQVCGICHEPVEDVVVTSCEHAFCKACLIDFSSSLGRVSCPTCSKLLTVDLTSNK 721

Query: 2474 NPGDMRTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFT 2653
            + GD   KTTIKG+R SSILNRI L  FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFT
Sbjct: 722  DVGDQANKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFT 781

Query: 2654 SFLDLINYSLQKSGIQCVQLVGSMTMTARDVAIRRFTEDPECKIFLMSLKAGGVALNLTV 2833
            SFLDLINYSL KSG+ CVQL GSM++ ARD AI+RFTEDP+CKIFLMSLKAGGVALNLTV
Sbjct: 782  SFLDLINYSLHKSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTV 841

Query: 2834 ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEG 3013
            ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ+KKELVFEG
Sbjct: 842  ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEG 901

Query: 3014 TVGGSSEALIKLTEADLRFLFAT 3082
            T+GGSS+AL KLTEADLRFLF T
Sbjct: 902  TIGGSSDALGKLTEADLRFLFVT 924


>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score = 1061 bits (2743), Expect = 0.0
 Identities = 534/794 (67%), Positives = 626/794 (78%), Gaps = 2/794 (0%)
 Frame = +2

Query: 707  KRGRKGEIRPPLMWENLEDEYSEWIDEHETENTDWDFAREEVTEAVEASKDLTLPLLRYQ 886
            ++GRKG+ +P L+W   E+E  +WID H  E+ D D   E + E  EA  DLT+PLLRYQ
Sbjct: 164  RKGRKGDSKPVLLWNAWEEEQEKWIDRHMLEDVDSDHQSEVMNETAEAPSDLTMPLLRYQ 223

Query: 887  KEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEG 1066
            KEWLAW +KQE S SKGGILADEMGMGKT+QAIALVLAKR   +        +P   S  
Sbjct: 224  KEWLAWGLKQESSASKGGILADEMGMGKTVQAIALVLAKREFEQSCEPDQS-IPC--SSS 280

Query: 1067 EQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDYDFVITTY 1246
             +  IK TLVICPVVAV QWV+EI + T++G+TKVL+YHGANR +S  +F+DYDFVITTY
Sbjct: 281  LKPAIKGTLVICPVVAVTQWVSEIDRFTLKGNTKVLIYHGANRGRSGNRFADYDFVITTY 340

Query: 1247 SIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQARKKENHGL 1426
            S+VE+EYRK+++PPKE+C +CGKL++P K+  H  Y+CGPDAV+T+KQSKQA+KK+    
Sbjct: 341  SVVESEYRKHMLPPKERCPYCGKLYLPNKLIYHQNYYCGPDAVRTEKQSKQAKKKKR--- 397

Query: 1427 KPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVVEEFETEEIGD 1606
            + ++ KTK   +   + S     EEE      W                 E+ +     D
Sbjct: 398  EVTQGKTKKCDSKKMSRSSNKKKEEE-----LWMDE--------------EDLDAPVCSD 438

Query: 1607 KSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQNRVGELY 1786
            +S     ILH+++W RIILDEAHYIK R  +TA+AVLALES+YKWALSGTPLQNRVGELY
Sbjct: 439  RS-----ILHAVKWQRIILDEAHYIKSRHCNTAKAVLALESTYKWALSGTPLQNRVGELY 493

Query: 1787 SLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATPIQVSSSS 1966
            SL+RFLQITPYSYY C+DCDC+ LD+S T +C  C H SVRHFCWWNK++A PIQ   + 
Sbjct: 494  SLIRFLQITPYSYYLCKDCDCRILDHS-TKECSVCTHSSVRHFCWWNKYVAGPIQSYGNG 552

Query: 1967 YDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIITMRRDTLDVKEEDYYESLYSDS 2146
              GKRAMILLKHK+LK+IVLRRTK GRA+DLALPPRI+++RRD LD+KE+DYYESLY++S
Sbjct: 553  DAGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQDYYESLYNES 612

Query: 2147 QLQFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRS--QNNTYISEQEC 2320
            Q QFNTYIEA TLMNNYAHIFDLLTRLRQAVDHPYLV+YS SA SRS    N    EQ C
Sbjct: 613  QAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAASRSGVMTNNGTVEQVC 672

Query: 2321 GICHDPAEDPVVTSCEHIFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNPGDMRTKT 2500
            GICH+P ED VVT+CEH FCKACL D++A+LG+VSCP+CSK LT D T   + GD   KT
Sbjct: 673  GICHEPVEDVVVTTCEHAFCKACLIDFSASLGRVSCPTCSKLLTVDLTFNKDVGDQANKT 732

Query: 2501 TIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSFLDLINYS 2680
            TIKG+R SSILNRI L  FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFTSFLDLINYS
Sbjct: 733  TIKGFRSSSILNRICLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 792

Query: 2681 LQKSGIQCVQLVGSMTMTARDVAIRRFTEDPECKIFLMSLKAGGVALNLTVASHVFLMDP 2860
            L KSG+ CVQL GSM++ ARD AI+RFTEDP+CKIFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 793  LHKSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 852

Query: 2861 WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTVGGSSEAL 3040
            WWNPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ+KKELVFEGT+GGSS+AL
Sbjct: 853  WWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSDAL 912

Query: 3041 IKLTEADLRFLFAT 3082
             KLTEADLRFLF T
Sbjct: 913  GKLTEADLRFLFVT 926


>ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223535886|gb|EEF37546.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 874

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 527/782 (67%), Positives = 616/782 (78%), Gaps = 1/782 (0%)
 Frame = +2

Query: 740  LMWENLEDEYSEWIDEHETENTDWDFAREEVTEAVEASKDLTLPLLRYQKEWLAWAMKQE 919
            L+W+  E+E   WID+H TE+ D D     VTE  E   +L +PLLRYQKEWLAWA+KQE
Sbjct: 115  LLWKIWEEENERWIDDHLTEDVDIDHQHGIVTETAEPPAELIMPLLRYQKEWLAWALKQE 174

Query: 920  ESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXXXMPLFGSEGEQSTIKATLVI 1099
            ES +KGGILADEMGMGKTIQAIALVLAKR I +          L GS  + S IK TLV+
Sbjct: 175  ESSTKGGILADEMGMGKTIQAIALVLAKREILRQNRESNGATLLPGSSIDPSGIKPTLVV 234

Query: 1100 CPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFSDYDFVITTYSIVEAEYRKNV 1279
            CPVVAV QWV EI + T EGSTKVLVYHGANR+KS+  F  +DFVITTYS VEAE+RK +
Sbjct: 235  CPVVAVTQWVKEIDRFTTEGSTKVLVYHGANREKSSKHFLGFDFVITTYSTVEAEFRKYM 294

Query: 1280 MPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQARKKENHGLKPSECKTKFAS 1459
            MPPK+KC +CGK F   K+ THL+YFCGPDA +T KQSKQ RKK    LK S   T+ A 
Sbjct: 295  MPPKDKCAYCGKSFYENKLATHLKYFCGPDAFRTAKQSKQDRKK----LKTSP--TEKAR 348

Query: 1460 ADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVVEEFETEEIGDKSRLKNSILHS 1639
            +D   +S +  D+ +  S  T+                    E  E+    R + S+LHS
Sbjct: 349  SD---ESPKIQDDVDVISGRTYRKRHAA-------------MEISEVELALRKEKSVLHS 392

Query: 1640 LRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPY 1819
            ++W+RIILDEAHY+KD+R +TA+A+ ALESSYKWALSGTPLQNRVGELYSLVRFLQI PY
Sbjct: 393  MKWDRIILDEAHYVKDKRCNTAKAIFALESSYKWALSGTPLQNRVGELYSLVRFLQIVPY 452

Query: 1820 SYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIATPIQVSSSSYDGKRAMILLK 1999
            S+Y C+DCDC+ LDY  ++QC +CPH SVRHFCWWNK++A PIQ   +   GKRAM+LL 
Sbjct: 453  SFYLCKDCDCRILDYRPSTQCSSCPHSSVRHFCWWNKYVAKPIQGYGTKDIGKRAMLLLT 512

Query: 2000 HKLLKSIVLRRTKKGRASDLALPPRIITMRRDTLDVKEEDYYESLYSDSQLQFNTYIEAG 2179
            HK+L++IVLRRTKKGRA+DLALPPR++ +RRDTLDVKEEDYY+SLY++SQ QFNTY++AG
Sbjct: 513  HKVLRNIVLRRTKKGRAADLALPPRMVMLRRDTLDVKEEDYYQSLYNESQAQFNTYVQAG 572

Query: 2180 TLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQNNTYI-SEQECGICHDPAEDPVV 2356
            TLMNNYAHIFDLLTRLRQAVDHPYLV+YS +   R  N     +EQ C ICHDPAEDPVV
Sbjct: 573  TLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTPPQRGGNLFDTDNEQVCDICHDPAEDPVV 632

Query: 2357 TSCEHIFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVNPGDMRTKTTIKGYRCSSILN 2536
            TSC H+FCKACL D++A+LG+VSCP+C   LT D T K + GD   KTTI G++ SSILN
Sbjct: 633  TSCSHVFCKACLLDFSASLGRVSCPTCYSLLTVDLTTKTDAGDQTAKTTIMGFKSSSILN 692

Query: 2537 RISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTSFLDLINYSLQKSGIQCVQLV 2716
            RI L +FQTSTKI+ALREEIRFMVERDG+AKGIVFSQFTSFLDLI+YSL KSGI CVQLV
Sbjct: 693  RIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLISYSLHKSGINCVQLV 752

Query: 2717 GSMTMTARDVAIRRFTEDPECKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD 2896
            GSM++ ARD AI+RF+EDP CKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD
Sbjct: 753  GSMSLPARDNAIKRFSEDPNCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQD 812

Query: 2897 RIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGTVGGSSEALIKLTEADLRFLF 3076
            RIHRIGQYKPIRI RF+IENTIEERIL+LQ+KKELVFEGT+GGSSEAL KLT  D++FLF
Sbjct: 813  RIHRIGQYKPIRIVRFVIENTIEERILQLQEKKELVFEGTLGGSSEALGKLTAEDMQFLF 872

Query: 3077 AT 3082
             T
Sbjct: 873  IT 874


>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|332189671|gb|AEE27792.1| Helicase protein with
            RING/U-box domain [Arabidopsis thaliana]
          Length = 833

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 519/802 (64%), Positives = 616/802 (76%), Gaps = 1/802 (0%)
 Frame = +2

Query: 680  PEGWKAPPKKRGRKGEIRPPLMWENLEDEYSEWIDEHETENTDWDFAREEVTEAVEASKD 859
            P   K   K   RK ++   L+WE  E E + WIDEH +E+ D D     + E  E   D
Sbjct: 77   PRASKKRKKPDARKEKV--VLLWETWEKEQNSWIDEHMSEDVDLDQHNAVIAETAEPPSD 134

Query: 860  LTLPLLRYQKEWLAWAMKQEESISKGGILADEMGMGKTIQAIALVLAKRVISKXXXXXXX 1039
            L +PLLRYQKE+LAWA KQE+S++ GGILADEMGMGKTIQAI+LVLA+R + +       
Sbjct: 135  LIMPLLRYQKEFLAWATKQEQSVA-GGILADEMGMGKTIQAISLVLARREVDRAQ----- 188

Query: 1040 XMPLFGSEGEQSTIKATLVICPVVAVLQWVNEIAQHTVEGSTKVLVYHGANRKKSAVQFS 1219
                FG          TLV+CP+VAV QW+NEIA+ T  GSTKVLVYHGA R K+  +F 
Sbjct: 189  ----FGEAAG-----CTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFM 239

Query: 1220 DYDFVITTYSIVEAEYRKNVMPPKEKCVWCGKLFVPKKMNTHLRYFCGPDAVKTDKQSKQ 1399
            +YDFV+TTYS VE+EYR+N+MP K +C +C K F PKK+  HLRYFCGP AVKT KQSKQ
Sbjct: 240  NYDFVLTTYSTVESEYRRNIMPSKVQCAYCSKSFYPKKLVIHLRYFCGPSAVKTAKQSKQ 299

Query: 1400 ARKKENHGLKPSECKTKFASADVENDSFEGSDEEEGNSKHTWXXXXXXXXXXXXXXXVVE 1579
             RKK           T  +S+    ++  G D++   SK                    +
Sbjct: 300  KRKK-----------TSDSSSQQGKEADAGEDKKLKKSKKK----------------TKQ 332

Query: 1580 EFETEEIGDKSRLKNSILHSLRWNRIILDEAHYIKDRRSSTARAVLALESSYKWALSGTP 1759
              E +++G   + K S+LHS++WNRIILDEAHYIK+RRS+TARAV ALE++Y+WALSGTP
Sbjct: 333  TVEKDQLGSDDKEK-SLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTP 391

Query: 1760 LQNRVGELYSLVRFLQITPYSYYFCRDCDCKNLDYSSTSQCPNCPHKSVRHFCWWNKFIA 1939
            LQNRVGELYSL+RFLQI PYSYYFC+DCDC+ LDY +   CP+CPH +VRHFCWWNK++A
Sbjct: 392  LQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVA 451

Query: 1940 TPIQVSSSSYDGKRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIITMRRDTLDVKEED 2119
             PI V  S   GKRAMILLKHK+LK I+LRRTK GRA+DLALPPRIIT+RRDTLDVKE D
Sbjct: 452  KPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFD 511

Query: 2120 YYESLYSDSQLQFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSNSAGSRSQN-N 2296
            YYESLY +SQ +FNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLV+YSNS+G+ +   +
Sbjct: 512  YYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANANLVD 571

Query: 2297 TYISEQECGICHDPAEDPVVTSCEHIFCKACLTDYAAALGQVSCPSCSKPLTADFTAKVN 2476
               SEQECG+CHDPAED VVTSC H+FCKACL  ++A+LG+V+CP+CSK LT D+T K +
Sbjct: 572  ENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKAD 631

Query: 2477 PGDMRTKTTIKGYRCSSILNRISLPEFQTSTKIDALREEIRFMVERDGAAKGIVFSQFTS 2656
                 +KTT+KG+R SSILNRI L +FQTSTKI+ALREEIRFMVERDG+AK IVFSQFTS
Sbjct: 632  TEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTS 691

Query: 2657 FLDLINYSLQKSGIQCVQLVGSMTMTARDVAIRRFTEDPECKIFLMSLKAGGVALNLTVA 2836
            FLDLINY+L K G+ CVQLVGSMTM ARD AI +F EDP+C++FLMSLKAGGVALNLTVA
Sbjct: 692  FLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVA 751

Query: 2837 SHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQQKKELVFEGT 3016
            SHVF+MDPWWNPAVERQAQDRIHRIGQYKPIR+ RFIIENT+EERIL+LQ+KKELVFEGT
Sbjct: 752  SHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGT 811

Query: 3017 VGGSSEALIKLTEADLRFLFAT 3082
            VGGS EA+ KLTE D+RFLF T
Sbjct: 812  VGGSQEAIGKLTEEDMRFLFTT 833