BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000212
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   250   7e-65
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   247   6e-64
sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   247   6e-64
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   246   1e-63
ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-62

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  250 bits (639), Expect = 7e-65
 Identities = 127/167 (76%), Positives = 141/167 (84%)
 Frame = +1

Query: 1   FYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASGLLLVTGP 180
           FYPADDVKKP +NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL+SGLLL+TGP
Sbjct: 64  FYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLITGP 123

Query: 181 FKVNGVPLRRVNQSYVIATSTKVDITGLDVAKFDDTYFAKEVARXXXXXXXXXXXXXXXX 360
           FK+NGVPLRRVNQSYVIATSTKVDI+G++V KFDD +FAK+  +                
Sbjct: 124 FKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAEKDE 183

Query: 361 XNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHE 501
            NVLPQ KKDDQK VD++LIKSIE+VPELKAYLAARFSLK+GMKPHE
Sbjct: 184 KNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHE 230


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  247 bits (631), Expect = 6e-64
 Identities = 126/167 (75%), Positives = 138/167 (82%)
 Frame = +1

Query: 1   FYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASGLLLVTGP 180
           FYPADD+KKP  NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL+SGLLLVTGP
Sbjct: 62  FYPADDIKKPLHNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 121

Query: 181 FKVNGVPLRRVNQSYVIATSTKVDITGLDVAKFDDTYFAKEVARXXXXXXXXXXXXXXXX 360
           FK+NGVPLRRVNQSYVIATSTKVDI+G++  KFDD YFAK+  +                
Sbjct: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAEKEE 181

Query: 361 XNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHE 501
            NVLPQ KKDDQK +D++LIKSIE VPELKAYLAARFSLK+GMKPHE
Sbjct: 182 KNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHE 228


>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  247 bits (631), Expect = 6e-64
 Identities = 126/167 (75%), Positives = 138/167 (82%)
 Frame = +1

Query: 1   FYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASGLLLVTGP 180
           FYPADDVKKP +NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL+SGLLLVTGP
Sbjct: 65  FYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 124

Query: 181 FKVNGVPLRRVNQSYVIATSTKVDITGLDVAKFDDTYFAKEVARXXXXXXXXXXXXXXXX 360
           FKVNGVPLRRVNQ+YVIATSTKVDI+G++V KFDD YF K+  +                
Sbjct: 125 FKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKE 184

Query: 361 XNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHE 501
            NVLPQ KKDDQKAVD +L+K+IE VPELKAYL ARFSLK+GMKPHE
Sbjct: 185 VNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHE 231


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  246 bits (629), Expect = 1e-63
 Identities = 127/167 (76%), Positives = 137/167 (82%)
 Frame = +1

Query: 1   FYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASGLLLVTGP 180
           FYPADDVKKP VNKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFL QL SGLLLVTGP
Sbjct: 62  FYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121

Query: 181 FKVNGVPLRRVNQSYVIATSTKVDITGLDVAKFDDTYFAKEVARXXXXXXXXXXXXXXXX 360
           FKVNGVPLRRVNQSYVIATSTKVDITG+ V KFDD YF+KEV +                
Sbjct: 122 FKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181

Query: 361 XNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHE 501
            + LPQ KKDDQKAVDS+L+KSIE+V +LK YLAARFSLK+GMKPHE
Sbjct: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHE 228


>ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|222847220|gb|EEE84767.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  243 bits (620), Expect = 1e-62
 Identities = 125/167 (74%), Positives = 134/167 (80%)
 Frame = +1

Query: 1   FYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASGLLLVTGP 180
           FYPADDVKKP  NKRK KPTKLR SITPGTVLIILAGRFKGKRVVFL QL SGLLLVTGP
Sbjct: 63  FYPADDVKKPLPNKRKPKPTKLRDSITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGP 122

Query: 181 FKVNGVPLRRVNQSYVIATSTKVDITGLDVAKFDDTYFAKEVARXXXXXXXXXXXXXXXX 360
           FK+NGVPLRRVNQSY+IATSTKVDI+G++V KFDD YFAK+  +                
Sbjct: 123 FKINGVPLRRVNQSYLIATSTKVDISGVNVEKFDDKYFAKKAEKKKKKGEDNFFEGEKEG 182

Query: 361 XNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHE 501
            N LPQ KKDDQK VD+ +IKSIESVPELKAYL ARFSLK GMKPHE
Sbjct: 183 ENALPQEKKDDQKLVDAQVIKSIESVPELKAYLGARFSLKDGMKPHE 229