BLASTX nr result

ID: Coptis23_contig00000206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000206
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531743.1| PREDICTED: uncharacterized protein LOC100527...   107   9e-22
ref|XP_003530233.1| PREDICTED: uncharacterized protein LOC100781...   105   4e-21
ref|XP_004135879.1| PREDICTED: uncharacterized protein LOC101214...   102   4e-20
ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp....   100   1e-19
ref|XP_004163510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   100   2e-19

>ref|XP_003531743.1| PREDICTED: uncharacterized protein LOC100527649 [Glycine max]
           gi|255632854|gb|ACU16780.1| unknown [Glycine max]
          Length = 77

 Score =  107 bits (268), Expect = 9e-22
 Identities = 46/63 (73%), Positives = 55/63 (87%)
 Frame = -2

Query: 516 MESNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEK 337
           M SN +VGGGFRS++ HYLYSGDKKHVFVG+ +I A+F +PW  M+RG+KHQSHQDYLEK
Sbjct: 1   MNSNSNVGGGFRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWYFMSRGTKHQSHQDYLEK 60

Query: 336 ADK 328
           ADK
Sbjct: 61  ADK 63


>ref|XP_003530233.1| PREDICTED: uncharacterized protein LOC100781956 [Glycine max]
          Length = 81

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = -2

Query: 513 ESNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEKA 334
           ++N +VGGG RS++ HYLYSGDKKHVFVG+ +I A+F +PW LMNRG+KHQSHQDYLEKA
Sbjct: 6   KANSNVGGGSRSRLNHYLYSGDKKHVFVGLTLITAVFTIPWFLMNRGTKHQSHQDYLEKA 65

Query: 333 DK 328
           DK
Sbjct: 66  DK 67


>ref|XP_004135879.1| PREDICTED: uncharacterized protein LOC101214375 [Cucumis sativus]
          Length = 83

 Score =  102 bits (254), Expect = 4e-20
 Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
 Frame = -2

Query: 513 ESNGSVGG--GFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLE 340
           +S G+ GG  GFRS+MEHYLYSGDKKHV  GIVI G +F +PW LMNRGSKH+SHQDY+E
Sbjct: 6   KSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHRSHQDYME 65

Query: 339 KADK 328
           +ADK
Sbjct: 66  RADK 69


>ref|XP_002889269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335110|gb|EFH65528.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = -2

Query: 513 ESNGSVGGGFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLEKA 334
           ES  ++GGGFR+KMEHY+YSG+KKHV  GI II  +F +PW LMN+GSKH+SHQDYLEKA
Sbjct: 4   ESKSNLGGGFRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEKA 63

Query: 333 DK 328
           D+
Sbjct: 64  DQ 65


>ref|XP_004163510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231692 [Cucumis sativus]
          Length = 94

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
 Frame = -2

Query: 513 ESNGSVGG--GFRSKMEHYLYSGDKKHVFVGIVIIGALFAVPWTLMNRGSKHQSHQDYLE 340
           +S G+ GG  GFRS+MEHYLYSGD KHV  GIVI G +F +PW LMNRGSKH+SHQDY+E
Sbjct: 6   KSGGASGGAGGFRSRMEHYLYSGDXKHVAAGIVIFGIIFGIPWALMNRGSKHRSHQDYME 65

Query: 339 KADK 328
           +ADK
Sbjct: 66  RADK 69


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