BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000181
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156548.1| PREDICTED: WD repeat-containing protein 18-l...   134   8e-30
ref|XP_004137310.1| PREDICTED: WD repeat-containing protein 18-l...   134   8e-30
ref|XP_002532118.1| WD-repeat protein, putative [Ricinus communi...   129   3e-28
ref|XP_002283662.2| PREDICTED: WD repeat-containing protein 18 [...   125   3e-27
emb|CBI20112.3| unnamed protein product [Vitis vinifera]              100   1e-19

>ref|XP_004156548.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
          Length = 374

 Score =  134 bits (337), Expect = 8e-30
 Identities = 78/163 (47%), Positives = 97/163 (59%), Gaps = 11/163 (6%)
 Frame = +3

Query: 6   VSYSHISTPTAS--LHLYNFWSPVAFSNXXXXXXXXXXXXXXDGFYIFCGGVSGYIHALI 179
           ++ SHI   TAS  +H+YN+W+  AF                DGFY+F GG+SGYIH L 
Sbjct: 50  IAVSHICPVTASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILS 109

Query: 180 LPSGCLLRSFPAHSKPVSCCIINHDASLLISGGDDGTICVFPLIHLL-----DNGNAHLS 344
           LPSG +L S PAH KPVSC  ++ D SLLISGGDDGTI V P+  L+     +N   H+ 
Sbjct: 110 LPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHI- 168

Query: 345 INALYCFSAHTSSVTAI----GASSPMIIISCSLDCTAKFWSL 461
              L+ F AHT SVT+I    G SS   I+SCSLD   K W+L
Sbjct: 169 ---LHQFLAHTDSVTSIYSGMGISSTQ-IVSCSLDGRCKLWNL 207


>ref|XP_004137310.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
          Length = 412

 Score =  134 bits (337), Expect = 8e-30
 Identities = 78/163 (47%), Positives = 97/163 (59%), Gaps = 11/163 (6%)
 Frame = +3

Query: 6   VSYSHISTPTAS--LHLYNFWSPVAFSNXXXXXXXXXXXXXXDGFYIFCGGVSGYIHALI 179
           ++ SHI   TAS  +H+YN+W+  AF                DGFY+F GG+SGYIH L 
Sbjct: 50  IAVSHICPVTASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILS 109

Query: 180 LPSGCLLRSFPAHSKPVSCCIINHDASLLISGGDDGTICVFPLIHLL-----DNGNAHLS 344
           LPSG +L S PAH KPVSC  ++ D SLLISGGDDGTI V P+  L+     +N   H+ 
Sbjct: 110 LPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHI- 168

Query: 345 INALYCFSAHTSSVTAI----GASSPMIIISCSLDCTAKFWSL 461
              L+ F AHT SVT+I    G SS   I+SCSLD   K W+L
Sbjct: 169 ---LHQFLAHTDSVTSIYSGMGISSTQ-IVSCSLDGRCKLWNL 207


>ref|XP_002532118.1| WD-repeat protein, putative [Ricinus communis]
           gi|223528198|gb|EEF30258.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 411

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/160 (46%), Positives = 97/160 (60%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   HVSYSHISTPTAS--LHLYNFWSPVAFSNXXXXXXXXXXXXXXDGFYIFCGGVSGYIHAL 176
           +++ SHIS+ TAS  +HLY +WS  A  +              DG Y+F GG+ G ++AL
Sbjct: 49  YIAASHISSATASGSIHLYTWWSSSALHHLPLPEPVAPLAATPDGSYLFAGGLFGNVYAL 108

Query: 177 ILPSGCLLRSFPAHSKPVSCCIINHDASLLISGGDDGTICVFPLIHLLD-NGNAHLSINA 353
            +PSG +L+SFPAHSKPVSC  I+ D+SLLISGGDDG I V P+  L++  G+ + S   
Sbjct: 109 SIPSGNILKSFPAHSKPVSCINISSDSSLLISGGDDGNIVVVPIFQLVEAPGSENESNLI 168

Query: 354 LYCFSAHTSSVTAI----GASSPMIIISCSLDCTAKFWSL 461
           L+ F AH   VT I    G   P  I+SCS D T K WSL
Sbjct: 169 LHSFPAHDGPVTGITVCMGICHP-TIVSCSTDSTCKLWSL 207


>ref|XP_002283662.2| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
          Length = 411

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/155 (45%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
 Frame = +3

Query: 6   VSYSHIS-TPTASLHLYNFWSPVAFSNXXXXXXXXXXXXXXDGFYIFCGGVSGYIHALIL 182
           ++ SHIS T   S++LYN+WS   F++              DG Y+F GG+SG+I+++ L
Sbjct: 50  IAASHISATGAGSINLYNWWSSAVFNHLPLPEPVAPLAATLDGAYLFAGGLSGHIYSISL 109

Query: 183 PSGCLLRSFPAHSKPVSCCIINHDASLLISGGDDGTICVFPLIHLLDNGNAHLSIN-ALY 359
           PSG  +++FPAHSK VSC  IN D SLLISG DDG+I V P+  L+         N A +
Sbjct: 110 PSGKTIQTFPAHSKSVSCLEINDDGSLLISGSDDGSIVVAPIFQLVATSPGKNPGNFASH 169

Query: 360 CFSAHTSSVTAIG-ASSPMIIISCSLDCTAKFWSL 461
           CF  H SSVT I        +ISCS D T KFWSL
Sbjct: 170 CFVGHASSVTTIRIGPCNSTMISCSADGTCKFWSL 204


>emb|CBI20112.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +3

Query: 6   VSYSHIS-TPTASLHLYNFWSPVAFSNXXXXXXXXXXXXXXDGFYIFCGGVSGYIHALIL 182
           ++ SHIS T   S++LYN+WS   F++              DG Y+F GG+SG+I+++ L
Sbjct: 50  IAASHISATGAGSINLYNWWSSAVFNHLPLPEPVAPLAATLDGAYLFAGGLSGHIYSISL 109

Query: 183 PSGCLLRSFPAHSKPVSCCIINHDASLLISGGDDGTICVFPLIHLL 320
           PSG  +++FPAHSK VSC  IN D SLLISG DDG+I V P+  L+
Sbjct: 110 PSGKTIQTFPAHSKSVSCLEINDDGSLLISGSDDGSIVVAPIFQLV 155