BLASTX nr result

ID: Coptis23_contig00000168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000168
         (1969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatul...   202   3e-49
ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]     200   1e-48
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...   199   2e-48
ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]     193   1e-46
ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-46

>ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatula]
            gi|355515154|gb|AES96777.1| (R)-mandelonitrile lyase
            [Medicago truncatula]
          Length = 543

 Score =  202 bits (513), Expect = 3e-49
 Identities = 122/303 (40%), Positives = 169/303 (55%)
 Frame = +1

Query: 877  IFALNGDGTKPRACGIRFIRSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILML 1056
            IF  NGD  + RA GI+FI+S+  LD +YE  +   + S S GDV+LSAGA+GSPQ+L+L
Sbjct: 248  IFHYNGDKNETRAKGIKFIKSNGSLDETYEAFIKKPNHSTSRGDVILSAGALGSPQLLLL 307

Query: 1057 SGIGPSELLNKFNIAPMIDAPQVGQDIRDHPGINFLLDAGIGNVPLALPDPSQVVGIASS 1236
            SGIGP E L KFNI  + +  QVGQ ++D+P I  L+D+   N    LPDP Q+ GI   
Sbjct: 308  SGIGPKEQLKKFNIPLVHEMKQVGQGMQDNPCIAILVDSKPEN---RLPDPPQIAGITED 364

Query: 1237 SRFLFQYAGGSKTSSRAGRALLGKLAYPSSKGNLELNSTDPRKNPSVRXXXXXXXXXXXX 1416
             + + + +    + + +   +  K+A P SKG LELN+TDPR NP+V+            
Sbjct: 365  LKIIVEASILPLSINESRVNIAAKIAMPLSKGYLELNNTDPRLNPTVKFNYLENENDMQE 424

Query: 1417 FVEMVHEMKKIARSMDSALGTKYCDRMDEIISGQKQEHNVETKKGLSTEEELREFCKMNK 1596
             ++M   + KIARS   A              G+ Q+      K +STE +LR+FCK N 
Sbjct: 425  CIKMTKLLNKIARSKSIA-----------FFLGESQQ-----SKLVSTEFDLRKFCKKNV 468

Query: 1597 TSYLXXXXXXXXXXXXDKDYKVFGVEGLRXXXXXXXXXXXXTSPMGTLLMLGRYQGIKML 1776
             +              DKDYKV G++GL+            T+PM TLLMLGRYQGIK+L
Sbjct: 469  RTIYHYHGGCNVGTVLDKDYKVHGIKGLKVLDGSTFSESPGTNPMATLLMLGRYQGIKIL 528

Query: 1777 RER 1785
            ++R
Sbjct: 529  QQR 531


>ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 559

 Score =  200 bits (509), Expect = 1e-48
 Identities = 122/303 (40%), Positives = 172/303 (56%)
 Frame = +1

Query: 877  IFALNGDGTKPRACGIRFIRSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILML 1056
            IF  + +  + RA GIRFI+S+  LD +YE  +N A +S S+GDV+L+AGA+GSPQ++ML
Sbjct: 263  IFHHSSNRNETRAKGIRFIQSNGTLDETYEAYINKAKNSSSKGDVILAAGALGSPQLMML 322

Query: 1057 SGIGPSELLNKFNIAPMIDAPQVGQDIRDHPGINFLLDAGIGNVPLALPDPSQVVGIASS 1236
            SGIGP E L +FNI+ + +   VGQ ++D+P I  L+D+   N    LPDP Q+ GI   
Sbjct: 323  SGIGPKEQLRRFNISIVHEMKGVGQGMQDNPCIAVLVDSKPQN---RLPDPPQIAGITDD 379

Query: 1237 SRFLFQYAGGSKTSSRAGRALLGKLAYPSSKGNLELNSTDPRKNPSVRXXXXXXXXXXXX 1416
             + + + +    TS+ +   +  K+A P+SKG LELN+TDPR NPSVR            
Sbjct: 380  FKIIVEASILPLTSNSSRVNVAAKIAMPTSKGMLELNNTDPRLNPSVRFNYLASDDDMEE 439

Query: 1417 FVEMVHEMKKIARSMDSALGTKYCDRMDEIISGQKQEHNVETKKGLSTEEELREFCKMNK 1596
             V+M   +++IARS   A            +   KQE      K  ST+ +LR FCK N 
Sbjct: 440  CVKMTKLLERIARSKSIAF----------FLGESKQE------KLTSTDIDLRNFCKKNV 483

Query: 1597 TSYLXXXXXXXXXXXXDKDYKVFGVEGLRXXXXXXXXXXXXTSPMGTLLMLGRYQGIKML 1776
             +              D+ YKV+G++GLR            T+PM +LLMLGRYQG+K+L
Sbjct: 484  RTIYHYHGGCTVGSVVDEHYKVYGIKGLRILDGSTFSESPGTNPMASLLMLGRYQGLKIL 543

Query: 1777 RER 1785
            RER
Sbjct: 544  RER 546


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
            communis] gi|223538333|gb|EEF39940.1|
            glucose-methanol-choline (gmc) oxidoreductase, putative
            [Ricinus communis]
          Length = 537

 Score =  199 bits (507), Expect = 2e-48
 Identities = 127/304 (41%), Positives = 168/304 (55%), Gaps = 1/304 (0%)
 Frame = +1

Query: 877  IFALNGDGTKPRACGIRFIRSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILML 1056
            IF  NG   +  A GIRFI+S+   D  YE  LN   +S S GDV+LSAGA+GSPQILML
Sbjct: 242  IFHNNGSENERIAHGIRFIKSNGSTDQIYEAYLNQPKNSSSWGDVILSAGALGSPQILML 301

Query: 1057 SGIGPSELLNKFNIAPMIDAPQVGQDIRDHPGINFLLDAGIGNVPLALPDPSQVVGIASS 1236
            SGIGP + L  F+I  + D   VGQ+++D+P I  L D    N    LPD  QVVGIA  
Sbjct: 302  SGIGPQKHLKNFSIPLVWDLKGVGQEMKDNPAIALLADT---NAEYRLPDTPQVVGIAKD 358

Query: 1237 SRFLFQYAGGSKTSSRAGRALLG-KLAYPSSKGNLELNSTDPRKNPSVRXXXXXXXXXXX 1413
             +F+ +  G    S  A R  +  KLA+P SKG L+L +TDPR+NP V+           
Sbjct: 359  FKFIVE-GGILPISFNATRMPIAVKLAFPESKGKLKLYNTDPRQNPLVKFNYLAEEKDLD 417

Query: 1414 XFVEMVHEMKKIARSMDSALGTKYCDRMDEIISGQKQEHNVETKKGLSTEEELREFCKMN 1593
              VEM   +++++RS   AL  +            + ++N+     LS+  ELR+FCK N
Sbjct: 418  GCVEMAQLLQRVSRSESVALFLR-----------SEPQNNL-----LSSPHELRDFCKKN 461

Query: 1594 KTSYLXXXXXXXXXXXXDKDYKVFGVEGLRXXXXXXXXXXXXTSPMGTLLMLGRYQGIKM 1773
              +Y             D DYKV+GV+GLR            T+PM TLLMLGRYQGI++
Sbjct: 462  VRTYYHYHGGCTVGSVVDNDYKVYGVKGLRVIDGSTFLESPGTNPMATLLMLGRYQGIRI 521

Query: 1774 LRER 1785
            LR+R
Sbjct: 522  LRDR 525


>ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 502

 Score =  193 bits (491), Expect = 1e-46
 Identities = 119/303 (39%), Positives = 169/303 (55%)
 Frame = +1

Query: 877  IFALNGDGTKPRACGIRFIRSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILML 1056
            IF  +    + RA GIRFI+S+  LD +YE  +N A +S S GDV+L+AGA+GSPQ++ML
Sbjct: 206  IFHHSSYRNETRAKGIRFIQSNGTLDETYEAYINKAKNSSSRGDVILAAGALGSPQLMML 265

Query: 1057 SGIGPSELLNKFNIAPMIDAPQVGQDIRDHPGINFLLDAGIGNVPLALPDPSQVVGIASS 1236
            SGIGP E L +FNI+ + +   VGQ ++D+P I  L+D+   N    LPDP Q+ GI   
Sbjct: 266  SGIGPKEQLRRFNISIVREMKGVGQGMQDNPCIAVLVDSKPQN---RLPDPPQIAGITDD 322

Query: 1237 SRFLFQYAGGSKTSSRAGRALLGKLAYPSSKGNLELNSTDPRKNPSVRXXXXXXXXXXXX 1416
             + + + +    +S+ +   +  K+A P+SKG LELN+TDPR NPSVR            
Sbjct: 323  FKIIVEASIFPLSSNSSRVNVAAKIAMPTSKGVLELNNTDPRLNPSVRFNYLASEDDMEE 382

Query: 1417 FVEMVHEMKKIARSMDSALGTKYCDRMDEIISGQKQEHNVETKKGLSTEEELREFCKMNK 1596
             V+M   +++IARS   A            +   KQE      K  ST+ +LR FCK N 
Sbjct: 383  CVKMTKLLERIARSKSIAF----------FLGESKQE------KLTSTDVDLRNFCKKNV 426

Query: 1597 TSYLXXXXXXXXXXXXDKDYKVFGVEGLRXXXXXXXXXXXXTSPMGTLLMLGRYQGIKML 1776
             +              D+  KV+G++GLR            T+PM T+LMLGRYQG+++L
Sbjct: 427  RTIYHYHGGCTVGSVVDEQNKVYGIKGLRILDGSTFSESPGTNPMATILMLGRYQGLQIL 486

Query: 1777 RER 1785
            RER
Sbjct: 487  RER 489


>ref|XP_002315048.1| predicted protein [Populus trichocarpa] gi|222864088|gb|EEF01219.1|
            predicted protein [Populus trichocarpa]
          Length = 538

 Score =  191 bits (486), Expect = 5e-46
 Identities = 123/304 (40%), Positives = 161/304 (52%), Gaps = 1/304 (0%)
 Frame = +1

Query: 877  IFALNGDGTKPRACGIRFIRSHEDLDSSYEVNLNPASDSESEGDVVLSAGAMGSPQILML 1056
            +F  +  G K    GIRFI S+  ++ +YE  L    +S  +GDV+LSAGA+GSPQIL+L
Sbjct: 242  VFRSDDKGKKSIVRGIRFINSNGSINQTYESYLTQPENSSPQGDVILSAGAIGSPQILLL 301

Query: 1057 SGIGPSELLNKFNIAPMIDAPQVGQDIRDHPGINFLLDAGIGNVPLALPDPSQVVGIASS 1236
            SGIGP   L  F+I  ++D   VGQD++D+PGI  +L A        LP+  QVVGIA  
Sbjct: 302  SGIGPKGHLGNFSIPLLLDLKGVGQDMQDNPGITLILRA---KPEYRLPESPQVVGIAKD 358

Query: 1237 SRFLFQ-YAGGSKTSSRAGRALLGKLAYPSSKGNLELNSTDPRKNPSVRXXXXXXXXXXX 1413
             +F+ + +      ++     +  KLA+P SKG LELN+TDPR+NP V            
Sbjct: 359  FKFVVEGFVLPVSFNATTLMRISIKLAFPESKGRLELNNTDPRQNPVVLFNYLAEEKDLR 418

Query: 1414 XFVEMVHEMKKIARSMDSALGTKYCDRMDEIISGQKQEHNVETKKGLSTEEELREFCKMN 1593
              V+MV  +KK+ARS   A              G K   NV      S   ELR FC+ N
Sbjct: 419  ECVQMVQLVKKVARSRSIAR-----------FLGAKPLINV-----TSNPNELRNFCRKN 462

Query: 1594 KTSYLXXXXXXXXXXXXDKDYKVFGVEGLRXXXXXXXXXXXXTSPMGTLLMLGRYQGIKM 1773
              +Y             D DYKV GV+GLR            T+PM TLLMLGRYQGIK+
Sbjct: 463  VRTYYHFHGGCSIGSVIDNDYKVIGVKGLRVIDGSTLSESPGTNPMATLLMLGRYQGIKI 522

Query: 1774 LRER 1785
            L+ER
Sbjct: 523  LKER 526


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