BLASTX nr result

ID: Coptis23_contig00000098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000098
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96079.1| unknown [Populus trichocarpa]                          288   2e-75
ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ri...   282   8e-74
ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   280   5e-73
ref|XP_004151999.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   280   5e-73
ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|2...   278   2e-72

>gb|ABK96079.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  288 bits (737), Expect = 2e-75
 Identities = 138/172 (80%), Positives = 153/172 (88%)
 Frame = +3

Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380
           PGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EPEVKFHSIGIISDD GE  T
Sbjct: 62  PGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPEVKFHSIGIISDDIGEINT 121

Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560
            LPV+ SQS   LF L+EGS Y+LKLTF+V  NIVSGL YSNTVWKGG++VDQSKGMLGT
Sbjct: 122 PLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSNTVWKGGIQVDQSKGMLGT 181

Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716
           FAPQREPY HTL+E+TTPSGVLARG YSAK KFEDDD+RCH+EL YSFEIKK
Sbjct: 182 FAPQREPYVHTLEEDTTPSGVLARGTYSAKLKFEDDDRRCHMELKYSFEIKK 233


>ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223534135|gb|EEF35852.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 244

 Score =  282 bits (722), Expect = 8e-74
 Identities = 135/172 (78%), Positives = 154/172 (89%)
 Frame = +3

Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380
           PGPLL+LK+Q++KDKDD+SLRRWKEKLLGCVE +LN QMEPEVKFHSIGIIS+D  E  T
Sbjct: 71  PGPLLSLKDQIDKDKDDDSLRRWKEKLLGCVESELNGQMEPEVKFHSIGIISNDLEEINT 130

Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560
            LPV+ ++S  +LFTLKEGS Y+LKLTF+V  NIVSGL YSNTVWKGGL+VD++KGMLGT
Sbjct: 131 PLPVDANRSGRLLFTLKEGSRYQLKLTFSVLHNIVSGLTYSNTVWKGGLQVDKNKGMLGT 190

Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716
           FAPQREPY HTL+EETTPSGVLARG YSAK KFEDDD+RCH+EL YSFEIKK
Sbjct: 191 FAPQREPYVHTLEEETTPSGVLARGTYSAKLKFEDDDRRCHMELKYSFEIKK 242


>ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 214

 Score =  280 bits (715), Expect = 5e-73
 Identities = 134/172 (77%), Positives = 152/172 (88%)
 Frame = +3

Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380
           PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EPEVKFHSIGIISD+ GE  T
Sbjct: 41  PGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNT 100

Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560
            LPVN ++S  VLFTL+EGS Y+L+LTFTV  NIVSGL YSN VW+GGL VDQ++GMLGT
Sbjct: 101 PLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGT 160

Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716
           FAPQREPY  TL+EETTPSG+LARG YSAK KFEDDD+RC++EL YSFEIKK
Sbjct: 161 FAPQREPYVETLEEETTPSGILARGIYSAKLKFEDDDKRCYMELPYSFEIKK 212


>ref|XP_004151999.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 214

 Score =  280 bits (715), Expect = 5e-73
 Identities = 134/172 (77%), Positives = 152/172 (88%)
 Frame = +3

Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380
           PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EPEVKFHSIGIISD+ GE  T
Sbjct: 41  PGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNT 100

Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560
            LPVN ++S  VLFTL+EGS Y+L+LTFTV  NIVSGL YSN VW+GGL VDQ++GMLGT
Sbjct: 101 PLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGT 160

Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716
           FAPQREPY  TL+EETTPSG+LARG YSAK KFEDDD+RC++EL YSFEIKK
Sbjct: 161 FAPQREPYVETLEEETTPSGILARGIYSAKLKFEDDDKRCYMELPYSFEIKK 212


>ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|222844849|gb|EEE82396.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  278 bits (710), Expect = 2e-72
 Identities = 138/188 (73%), Positives = 153/188 (81%), Gaps = 16/188 (8%)
 Frame = +3

Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380
           PGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EPEVKFHSIGIISDD GE  T
Sbjct: 62  PGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPEVKFHSIGIISDDIGEINT 121

Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560
            LPV+ SQS   LF L+EGS Y+LKLTF+V  NIVSGL YSNTVWKGG++VDQSKGMLGT
Sbjct: 122 PLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSNTVWKGGIQVDQSKGMLGT 181

Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFK----------------FEDDDQRCHLEL 692
           FAPQREPY HTL+E+TTPSGVLARG YSAK K                FEDDD+RCH+EL
Sbjct: 182 FAPQREPYVHTLEEDTTPSGVLARGTYSAKLKANIISSFYILGCCLMQFEDDDRRCHMEL 241

Query: 693 NYSFEIKK 716
            YSFEIKK
Sbjct: 242 KYSFEIKK 249


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