BLASTX nr result
ID: Coptis23_contig00000098
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00000098 (1049 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96079.1| unknown [Populus trichocarpa] 288 2e-75 ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ri... 282 8e-74 ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-... 280 5e-73 ref|XP_004151999.1| PREDICTED: rho GDP-dissociation inhibitor 1-... 280 5e-73 ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|2... 278 2e-72 >gb|ABK96079.1| unknown [Populus trichocarpa] Length = 235 Score = 288 bits (737), Expect = 2e-75 Identities = 138/172 (80%), Positives = 153/172 (88%) Frame = +3 Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380 PGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EPEVKFHSIGIISDD GE T Sbjct: 62 PGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPEVKFHSIGIISDDIGEINT 121 Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560 LPV+ SQS LF L+EGS Y+LKLTF+V NIVSGL YSNTVWKGG++VDQSKGMLGT Sbjct: 122 PLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSNTVWKGGIQVDQSKGMLGT 181 Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716 FAPQREPY HTL+E+TTPSGVLARG YSAK KFEDDD+RCH+EL YSFEIKK Sbjct: 182 FAPQREPYVHTLEEDTTPSGVLARGTYSAKLKFEDDDRRCHMELKYSFEIKK 233 >ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis] gi|223534135|gb|EEF35852.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis] Length = 244 Score = 282 bits (722), Expect = 8e-74 Identities = 135/172 (78%), Positives = 154/172 (89%) Frame = +3 Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380 PGPLL+LK+Q++KDKDD+SLRRWKEKLLGCVE +LN QMEPEVKFHSIGIIS+D E T Sbjct: 71 PGPLLSLKDQIDKDKDDDSLRRWKEKLLGCVESELNGQMEPEVKFHSIGIISNDLEEINT 130 Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560 LPV+ ++S +LFTLKEGS Y+LKLTF+V NIVSGL YSNTVWKGGL+VD++KGMLGT Sbjct: 131 PLPVDANRSGRLLFTLKEGSRYQLKLTFSVLHNIVSGLTYSNTVWKGGLQVDKNKGMLGT 190 Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716 FAPQREPY HTL+EETTPSGVLARG YSAK KFEDDD+RCH+EL YSFEIKK Sbjct: 191 FAPQREPYVHTLEEETTPSGVLARGTYSAKLKFEDDDRRCHMELKYSFEIKK 242 >ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus] Length = 214 Score = 280 bits (715), Expect = 5e-73 Identities = 134/172 (77%), Positives = 152/172 (88%) Frame = +3 Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380 PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EPEVKFHSIGIISD+ GE T Sbjct: 41 PGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNT 100 Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560 LPVN ++S VLFTL+EGS Y+L+LTFTV NIVSGL YSN VW+GGL VDQ++GMLGT Sbjct: 101 PLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGT 160 Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716 FAPQREPY TL+EETTPSG+LARG YSAK KFEDDD+RC++EL YSFEIKK Sbjct: 161 FAPQREPYVETLEEETTPSGILARGIYSAKLKFEDDDKRCYMELPYSFEIKK 212 >ref|XP_004151999.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus] Length = 214 Score = 280 bits (715), Expect = 5e-73 Identities = 134/172 (77%), Positives = 152/172 (88%) Frame = +3 Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380 PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EPEVKFHSIGIISD+ GE T Sbjct: 41 PGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNT 100 Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560 LPVN ++S VLFTL+EGS Y+L+LTFTV NIVSGL YSN VW+GGL VDQ++GMLGT Sbjct: 101 PLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGT 160 Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFKFEDDDQRCHLELNYSFEIKK 716 FAPQREPY TL+EETTPSG+LARG YSAK KFEDDD+RC++EL YSFEIKK Sbjct: 161 FAPQREPYVETLEEETTPSGILARGIYSAKLKFEDDDKRCYMELPYSFEIKK 212 >ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|222844849|gb|EEE82396.1| predicted protein [Populus trichocarpa] Length = 251 Score = 278 bits (710), Expect = 2e-72 Identities = 138/188 (73%), Positives = 153/188 (81%), Gaps = 16/188 (8%) Frame = +3 Query: 201 PGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEEDLNDQMEPEVKFHSIGIISDDCGETTT 380 PGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EPEVKFHSIGIISDD GE T Sbjct: 62 PGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPEVKFHSIGIISDDIGEINT 121 Query: 381 QLPVNRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGT 560 LPV+ SQS LF L+EGS Y+LKLTF+V NIVSGL YSNTVWKGG++VDQSKGMLGT Sbjct: 122 PLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSNTVWKGGIQVDQSKGMLGT 181 Query: 561 FAPQREPYTHTLDEETTPSGVLARGFYSAKFK----------------FEDDDQRCHLEL 692 FAPQREPY HTL+E+TTPSGVLARG YSAK K FEDDD+RCH+EL Sbjct: 182 FAPQREPYVHTLEEDTTPSGVLARGTYSAKLKANIISSFYILGCCLMQFEDDDRRCHMEL 241 Query: 693 NYSFEIKK 716 YSFEIKK Sbjct: 242 KYSFEIKK 249