BLASTX nr result

ID: Coptis23_contig00000082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000082
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL278...   700   0.0  
gb|AAN40685.1| actin [Stevia rebaudiana]                              700   0.0  
gb|AAP73462.1| actin [Gossypium hirsutum]                             699   0.0  
gb|AAP73451.1| actin [Gossypium hirsutum]                             699   0.0  
dbj|BAL14271.1| actin, partial [Malus x domestica]                    699   0.0  

>gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL27885.1| actin
            [Helianthus annuus] gi|219563048|gb|ACL27886.1| actin
            [Helianthus annuus] gi|306922316|dbj|BAJ17659.1| actin
            [Gynura bicolor]
          Length = 377

 Score =  700 bits (1807), Expect = 0.0
 Identities = 350/351 (99%), Positives = 351/351 (100%)
 Frame = -1

Query: 1653 MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 1474
            MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 18   MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 77

Query: 1473 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 1294
            VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA
Sbjct: 78   VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 137

Query: 1293 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 1114
            IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE
Sbjct: 138  IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197

Query: 1113 RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERF 934
            RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK+YELPDGQVITIGAERF
Sbjct: 198  RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 257

Query: 933  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 754
            RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK
Sbjct: 258  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 317

Query: 753  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 601
            EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG
Sbjct: 318  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 368


>gb|AAN40685.1| actin [Stevia rebaudiana]
          Length = 377

 Score =  700 bits (1807), Expect = 0.0
 Identities = 350/351 (99%), Positives = 351/351 (100%)
 Frame = -1

Query: 1653 MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 1474
            MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 18   MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 77

Query: 1473 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 1294
            VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA
Sbjct: 78   VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 137

Query: 1293 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 1114
            IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE
Sbjct: 138  IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197

Query: 1113 RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERF 934
            RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK+YELPDGQVITIGAERF
Sbjct: 198  RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 257

Query: 933  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 754
            RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK
Sbjct: 258  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 317

Query: 753  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 601
            EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG
Sbjct: 318  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 368


>gb|AAP73462.1| actin [Gossypium hirsutum]
          Length = 377

 Score =  699 bits (1804), Expect = 0.0
 Identities = 349/351 (99%), Positives = 351/351 (100%)
 Frame = -1

Query: 1653 MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 1474
            MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 18   MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 77

Query: 1473 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 1294
            VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA
Sbjct: 78   VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 137

Query: 1293 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 1114
            IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE
Sbjct: 138  IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197

Query: 1113 RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERF 934
            RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK+YELPDGQVITIGAERF
Sbjct: 198  RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 257

Query: 933  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 754
            RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDI+KDLYGNIVLSGGSTMFPGIADRMSK
Sbjct: 258  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIKKDLYGNIVLSGGSTMFPGIADRMSK 317

Query: 753  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 601
            EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG
Sbjct: 318  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 368


>gb|AAP73451.1| actin [Gossypium hirsutum]
          Length = 377

 Score =  699 bits (1804), Expect = 0.0
 Identities = 349/351 (99%), Positives = 351/351 (100%)
 Frame = -1

Query: 1653 MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 1474
            MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 18   MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 77

Query: 1473 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 1294
            VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA
Sbjct: 78   VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 137

Query: 1293 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 1114
            IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR+DLAGRDLTDSLMKILTE
Sbjct: 138  IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRVDLAGRDLTDSLMKILTE 197

Query: 1113 RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERF 934
            RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK+YELPDGQVITIGAERF
Sbjct: 198  RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 257

Query: 933  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 754
            RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK
Sbjct: 258  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 317

Query: 753  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 601
            EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG
Sbjct: 318  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 368


>dbj|BAL14271.1| actin, partial [Malus x domestica]
          Length = 363

 Score =  699 bits (1804), Expect = 0.0
 Identities = 349/351 (99%), Positives = 351/351 (100%)
 Frame = -1

Query: 1653 MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 1474
            MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 4    MVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI 63

Query: 1473 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 1294
            VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA
Sbjct: 64   VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA 123

Query: 1293 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 1114
            IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE
Sbjct: 124  IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 183

Query: 1113 RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERF 934
            RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK+YELPDGQVITIGAERF
Sbjct: 184  RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERF 243

Query: 933  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 754
            RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS+
Sbjct: 244  RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSR 303

Query: 753  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 601
            EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG
Sbjct: 304  EITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 354


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