BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000054
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquino...   154   6e-36
ref|XP_003517234.1| PREDICTED: succinate dehydrogenase [ubiquino...   154   6e-36
gb|AEL99040.1| succinate dehydrogenase [ubiquinone] flavoprotein...   154   7e-36
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/98 (77%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 RFFSSGSNGGG--YTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTV 117
           RFFS+ S GGG  YT+VDHTYD                LSEHGFNTACITKLFPTRSHTV
Sbjct: 32  RFFSADSTGGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTV 91

Query: 116 AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 3
           AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI
Sbjct: 92  AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 129


>ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/96 (78%), Positives = 77/96 (80%)
 Frame = -2

Query: 290 RFFSSGSNGGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAA 111
           RFFSSG+N   YT+VDHTYD                LSEHGFNTACITKLFPTRSHTVAA
Sbjct: 29  RFFSSGANSS-YTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAA 87

Query: 110 QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 3
           QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI
Sbjct: 88  QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 123


>ref|XP_003517234.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/96 (78%), Positives = 77/96 (80%)
 Frame = -2

Query: 290 RFFSSGSNGGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAA 111
           RFFSSG+N   YT+VDHTYD                LSEHGFNTACITKLFPTRSHTVAA
Sbjct: 29  RFFSSGANSS-YTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAA 87

Query: 110 QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 3
           QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI
Sbjct: 88  QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 123


>gb|AEL99040.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1,
           partial [Silene latifolia]
          Length = 262

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/96 (78%), Positives = 77/96 (80%)
 Frame = -2

Query: 290 RFFSSGSNGGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAA 111
           RFFSS S+GG YT+VDH YD                LSEHGFNTACITKLFPTRSHTVAA
Sbjct: 21  RFFSSNSSGG-YTVVDHAYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAA 79

Query: 110 QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 3
           QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI
Sbjct: 80  QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 115


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/98 (75%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 RFFSSGSNGG--GYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTV 117
           RFFS+ + GG   YT+VDHTYD                LSEHGFNTACITKLFPTRSHTV
Sbjct: 29  RFFSTDTTGGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTV 88

Query: 116 AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 3
           AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI
Sbjct: 89  AAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 126