BLASTX nr result

ID: Coptis21_contig00041380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041380
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276017.1| PREDICTED: uncharacterized protein LOC100257...    96   2e-18
ref|XP_002305491.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|ABK95343.1| unknown [Populus trichocarpa]                           84   2e-14
ref|XP_002528264.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_003522734.1| PREDICTED: uncharacterized protein LOC100780...    82   6e-14

>ref|XP_002276017.1| PREDICTED: uncharacterized protein LOC100257238 [Vitis vinifera]
           gi|297744650|emb|CBI37912.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   YAQLSGNGQGSTSCGAAPGPAQQLRLMFRMFDMEMYAVDSLLSQPAQPMSFC 158
           YAQ+SG+GQGST C AA GPAQ +RLMFRMFDMEMYAVDSLLSQPAQPMSFC
Sbjct: 93  YAQISGSGQGSTGCRAAAGPAQSVRLMFRMFDMEMYAVDSLLSQPAQPMSFC 144


>ref|XP_002305491.1| predicted protein [Populus trichocarpa] gi|222848455|gb|EEE86002.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   YAQLSGNGQGSTSCGAAPGPAQQLRLMFRMFDMEMYAVDSLLSQPAQPMSFC 158
           YAQ+S +GQGS +CGAA GPAQ+LRL FRMFDME YAVDSLL++P+  MSFC
Sbjct: 93  YAQVSSSGQGSNACGAAAGPAQKLRLTFRMFDMEFYAVDSLLTEPSASMSFC 144


>gb|ABK95343.1| unknown [Populus trichocarpa]
          Length = 318

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   YAQLSGNGQGSTSCGAAPGPAQQLRLMFRMFDMEMYAVDSLLSQPAQPMSFC 158
           YAQ+S +GQGS +CGAA GPAQ+LRL FRMFDME YAVDSLL++P+  MSFC
Sbjct: 93  YAQVSSSGQGSNACGAAAGPAQKLRLTFRMFDMEFYAVDSLLTEPSASMSFC 144


>ref|XP_002528264.1| conserved hypothetical protein [Ricinus communis]
           gi|223532301|gb|EEF34102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 321

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +3

Query: 3   YAQLSGNGQGSTSCGAAPGPAQQLRLMFRMFDMEMYAVDSLLSQPAQPMSFC 158
           YAQ+S + Q S  C  A GPAQ+LRLMF MFDME+Y+VDSLLSQPAQPMSFC
Sbjct: 94  YAQVSSSDQSSNGCNIAAGPAQKLRLMFSMFDMEIYSVDSLLSQPAQPMSFC 145


>ref|XP_003522734.1| PREDICTED: uncharacterized protein LOC100780626 [Glycine max]
          Length = 332

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 6   AQLSGNGQGSTSCGAAPGPAQQLRLMFRMFDMEMYAVDSLLSQPAQPMSFC 158
           A +SG+GQGST CG   GP+Q  +LMFRMFDMEMY VDSLL+QPAQPM +C
Sbjct: 94  AHVSGSGQGSTGCGEVAGPSQNPKLMFRMFDMEMYTVDSLLAQPAQPMQYC 144


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