BLASTX nr result

ID: Coptis21_contig00041377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041377
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535170.1| conserved hypothetical protein [Ricinus comm...    77   3e-14

>ref|XP_002535170.1| conserved hypothetical protein [Ricinus communis]
           gi|255598352|ref|XP_002536987.1| conserved hypothetical
           protein [Ricinus communis] gi|223517891|gb|EEF25396.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223523842|gb|EEF27215.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 122

 Score = 76.6 bits (187), Expect(2) = 3e-14
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -3

Query: 257 DEWGILLVTVPIVGRTNAAGGVQNRPAEDGRVHVVEPRARE 135
           +EWGILLVTVP+  RTNAAGGVQNRPAEDGRV+VVEPRARE
Sbjct: 28  EEWGILLVTVPMFRRTNAAGGVQNRPAEDGRVNVVEPRARE 68



 Score = 26.6 bits (57), Expect(2) = 3e-14
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -1

Query: 55  VSQRQQKGGGSG 20
           VSQRQQKGGG G
Sbjct: 72  VSQRQQKGGGDG 83


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