BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041367
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    92   4e-17
emb|CBI32615.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    89   3e-16
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    80   2e-13
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra...    79   3e-13

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
 Frame = +1

Query: 1    QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSE-DNSNG---- 165
            ++ L VS G MP W  QLM  +PFLF FEAR KYF+  + G  + Q HS   N++G    
Sbjct: 1107 RDPLAVSIGGMPLWCNQLMALYPFLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSD 1166

Query: 166  RRSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288
            RR +   L RKKF VCR RIL+SAA++M+   C + +LEVE
Sbjct: 1167 RRHNAGSLPRKKFLVCRDRILDSAAQMMNLHACQKVVLEVE 1207


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
 Frame = +1

Query: 1    QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSE-DNSNG---- 165
            ++ L VS G MP W  QLM  +PFLF FEAR KYF+  + G  + Q HS   N++G    
Sbjct: 1063 RDPLAVSIGGMPLWCNQLMALYPFLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSD 1122

Query: 166  RRSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288
            RR +   L RKKF VCR RIL+SAA++M+   C + +LEVE
Sbjct: 1123 RRHNAGSLPRKKFLVCRDRILDSAAQMMNLHACQKVVLEVE 1163


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = +1

Query: 1    QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSEDNSNG----R 168
            ++SL VS G MP W  QLM + PFLFSFEAR KYF+  + G  +VQ H   N +G    R
Sbjct: 1092 RDSLAVSIGGMPLWCNQLMASCPFLFSFEARCKYFKLEAFGQPQVQPHISHNGSGTVSDR 1151

Query: 169  RSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288
            R    GL RKKF V R RILESAA++M     ++ +LEVE
Sbjct: 1152 RLGPGGLPRKKFLVHRDRILESAAQMMDLHASNKVVLEVE 1191


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1    QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQ-AHSEDNS-NGRRS 174
            ++SL VS   MP W  QLM + PFLFSFEAR KYF+  + G  +VQ +H+   + + RR 
Sbjct: 1093 RDSLAVSICGMPLWCNQLMASCPFLFSFEARCKYFRLAAFGQPQVQPSHNGSGTVSDRRL 1152

Query: 175  HTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288
               GL RKKF V R RILESAA++M     ++ +LEVE
Sbjct: 1153 SPGGLPRKKFLVHRDRILESAAQMMDLHASNKVVLEVE 1190


>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
            gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1509

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
 Frame = +1

Query: 1    QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSEDNSNGR---- 168
            ++S  VS+  +P W+  LM++ PFLFSFE +SKYF+  + GS +V  H +  S+      
Sbjct: 1050 RDSFAVSTCGLPPWFNDLMDSCPFLFSFEVKSKYFRLAAFGSQKVHHHPQHLSSSNVQGD 1109

Query: 169  -RSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVERS 294
             R  T  L RKKF VCR +ILESAA++M      + ++EVE S
Sbjct: 1110 GRPVTGSLPRKKFLVCREKILESAAKMMELYGNQKVVIEVEYS 1152