BLASTX nr result
ID: Coptis21_contig00041367
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00041367 (296 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 92 4e-17 emb|CBI32615.3| unnamed protein product [Vitis vinifera] 92 4e-17 ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 89 3e-16 ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 80 2e-13 ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra... 79 3e-13 >ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera] Length = 1575 Score = 92.0 bits (227), Expect = 4e-17 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%) Frame = +1 Query: 1 QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSE-DNSNG---- 165 ++ L VS G MP W QLM +PFLF FEAR KYF+ + G + Q HS N++G Sbjct: 1107 RDPLAVSIGGMPLWCNQLMALYPFLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSD 1166 Query: 166 RRSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288 RR + L RKKF VCR RIL+SAA++M+ C + +LEVE Sbjct: 1167 RRHNAGSLPRKKFLVCRDRILDSAAQMMNLHACQKVVLEVE 1207 >emb|CBI32615.3| unnamed protein product [Vitis vinifera] Length = 1487 Score = 92.0 bits (227), Expect = 4e-17 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 5/101 (4%) Frame = +1 Query: 1 QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSE-DNSNG---- 165 ++ L VS G MP W QLM +PFLF FEAR KYF+ + G + Q HS N++G Sbjct: 1063 RDPLAVSIGGMPLWCNQLMALYPFLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSD 1122 Query: 166 RRSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288 RR + L RKKF VCR RIL+SAA++M+ C + +LEVE Sbjct: 1123 RRHNAGSLPRKKFLVCRDRILDSAAQMMNLHACQKVVLEVE 1163 >ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max] Length = 1558 Score = 89.4 bits (220), Expect = 3e-16 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 4/100 (4%) Frame = +1 Query: 1 QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSEDNSNG----R 168 ++SL VS G MP W QLM + PFLFSFEAR KYF+ + G +VQ H N +G R Sbjct: 1092 RDSLAVSIGGMPLWCNQLMASCPFLFSFEARCKYFKLEAFGQPQVQPHISHNGSGTVSDR 1151 Query: 169 RSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288 R GL RKKF V R RILESAA++M ++ +LEVE Sbjct: 1152 RLGPGGLPRKKFLVHRDRILESAAQMMDLHASNKVVLEVE 1191 >ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max] Length = 1557 Score = 80.1 bits (196), Expect = 2e-13 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Frame = +1 Query: 1 QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQ-AHSEDNS-NGRRS 174 ++SL VS MP W QLM + PFLFSFEAR KYF+ + G +VQ +H+ + + RR Sbjct: 1093 RDSLAVSICGMPLWCNQLMASCPFLFSFEARCKYFRLAAFGQPQVQPSHNGSGTVSDRRL 1152 Query: 175 HTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVE 288 GL RKKF V R RILESAA++M ++ +LEVE Sbjct: 1153 SPGGLPRKKFLVHRDRILESAAQMMDLHASNKVVLEVE 1190 >ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata] gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata] Length = 1509 Score = 79.3 bits (194), Expect = 3e-13 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 5/103 (4%) Frame = +1 Query: 1 QESLIVSSGSMPSWWMQLMEAFPFLFSFEARSKYFQRTSHGSFEVQAHSEDNSNGR---- 168 ++S VS+ +P W+ LM++ PFLFSFE +SKYF+ + GS +V H + S+ Sbjct: 1050 RDSFAVSTCGLPPWFNDLMDSCPFLFSFEVKSKYFRLAAFGSQKVHHHPQHLSSSNVQGD 1109 Query: 169 -RSHTLGLARKKFKVCRSRILESAAEIMSSRKCHEAILEVERS 294 R T L RKKF VCR +ILESAA++M + ++EVE S Sbjct: 1110 GRPVTGSLPRKKFLVCREKILESAAKMMELYGNQKVVIEVEYS 1152