BLASTX nr result

ID: Coptis21_contig00041342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041342
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25381.1| unknown [Picea sitchensis]                              62   5e-08
ref|XP_002279091.1| PREDICTED: glycerol-3-phosphate acyltransfer...    60   1e-07
gb|AGC91763.1| glycerol-3-phosphate acyltransferase 6 [Brassica ...    58   9e-07
ref|XP_002881564.1| glycerol-3-phosphate acyltransferase 6 [Arab...    58   9e-07
ref|XP_002309124.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>gb|ABK25381.1| unknown [Picea sitchensis]
          Length = 512

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -2

Query: 144 YLGVEKFIGTQIKMSRSGRATGFVKKPCVLVGK-RKEAVEREFGENI 7
           YLG +K +GT++++SRSGRATGFVKKP VLVG  +K AVE EFG+ +
Sbjct: 148 YLGADKVLGTELQVSRSGRATGFVKKPGVLVGDLKKAAVEAEFGDKL 194


>ref|XP_002279091.1| PREDICTED: glycerol-3-phosphate acyltransferase 6 [Vitis vinifera]
          Length = 499

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = -2

Query: 144 YLGVEKFIGTQIKMSRSGRATGFVKKPCVLVGK-RKEAVEREFGENI 7
           Y+G +K +GT++++S SGRATGFVKKP VLVG+ +K AV++EFG N+
Sbjct: 141 YMGADKVLGTELEVSNSGRATGFVKKPGVLVGEHKKAAVQQEFGMNL 187


>gb|AGC91763.1| glycerol-3-phosphate acyltransferase 6 [Brassica napus]
          Length = 501

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/44 (61%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
 Frame = -2

Query: 144 YLGVEKFIGTQIKMSRSGRATGFVKKPCVLVGKRK-EAVEREFG 16
           YLGV K +GT++++S+SGRATGFV++P VLVG+ K +A+ REFG
Sbjct: 144 YLGVNKVLGTELEVSKSGRATGFVRRPGVLVGQHKCDAILREFG 187


>ref|XP_002881564.1| glycerol-3-phosphate acyltransferase 6 [Arabidopsis lyrata subsp.
           lyrata] gi|297327403|gb|EFH57823.1| glycerol-3-phosphate
           acyltransferase 6 [Arabidopsis lyrata subsp. lyrata]
          Length = 501

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/44 (61%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
 Frame = -2

Query: 144 YLGVEKFIGTQIKMSRSGRATGFVKKPCVLVGKRK-EAVEREFG 16
           YLGV+K +GT++++S+SGRATGF +KP +LVG+ K E V REFG
Sbjct: 144 YLGVDKVLGTELEVSKSGRATGFTRKPGILVGQHKREVVLREFG 187


>ref|XP_002309124.1| predicted protein [Populus trichocarpa] gi|222855100|gb|EEE92647.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -2

Query: 144 YLGVEKFIGTQIKMSRSGRATGFVKKPCVLVGKRK-EAVEREFGENI 7
           +LG +K +GT+++ ++SGRATGF+KKP VLVG  K +A+ +EFG N+
Sbjct: 143 FLGADKVLGTELEATKSGRATGFIKKPGVLVGDHKRDALLKEFGTNL 189