BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041320
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15196.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]    96   3e-18
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
gb|ACE80857.1| pentatricopeptide repeat protein [Lophocolea cusp...    62   5e-08

>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -1

Query: 285 VRQKMVEIGVNKRPGRSWIQVDGVIHDFVAGDWTHKHASAICETVREITSQAKLVDQMLE 106
           VRQKMVEIGV K  GRSW+Q++GV+HDFVAGDWTHKHAS++ E + +IT QAKL    L+
Sbjct: 399 VRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLD 458

Query: 105 LSEAFPDV 82
           +SE   DV
Sbjct: 459 ISEVLLDV 466


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -1

Query: 285 VRQKMVEIGVNKRPGRSWIQVDGVIHDFVAGDWTHKHASAICETVREITSQAKLVDQMLE 106
           VRQKMVEIGV K  GRSW+Q++GV+HDFVAGDWTHKHAS++ E + +IT QAKL    L+
Sbjct: 485 VRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLD 544

Query: 105 LSEAFPDV 82
           +SE   DV
Sbjct: 545 ISEVLLDV 552


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -1

Query: 285 VRQKMVEIGVNKRPGRSWIQVDGVIHDFVAGDWTHKHASAICETVREITSQAKLVDQMLE 106
           VRQKMVEIGV K  GRSW+Q++GV+HDFVAGDWTHKHAS++ E + +IT QAKL    L+
Sbjct: 501 VRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGYKLD 560

Query: 105 LSEAFPDV 82
           +SE   DV
Sbjct: 561 ISEVLLDV 568


>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = -1

Query: 285 VRQKMVEIGVNKRPGRSWIQVDGVIHDFVAGDWTHKHASAICETVREITSQAKL 124
           VRQKM+E+GV K PGRSWIQ++GV+H+F+AGD THKH+S I ET+R++T QA L
Sbjct: 410 VRQKMIEMGVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQANL 463


>gb|ACE80857.1| pentatricopeptide repeat protein [Lophocolea cuspidata]
          Length = 152

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -1

Query: 285 VRQKMVEIGVNKRPGRSWIQVDGVIHDFVAGDWTHKHASAICETVREITSQAK 127
           VR+KM   GV K PGRSWI+VD  IH+FV GD +H  ASAI + ++++T + K
Sbjct: 12  VRRKMQTSGVCKEPGRSWIEVDNKIHEFVVGDTSHPEASAIYDVLKKLTEELK 64