BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041317
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30147.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_003628879.1| Pentatricopeptide repeat-containing protein ...    80   1e-13
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = -2

Query: 216 GARYVVLSNMLTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQASDKSHPQT 37
           GARYV+LSN+L DAN+WE+A +VRK+ME  GI KP GWS IE  G +HRF ASDKSHPQ 
Sbjct: 338 GARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQG 397

Query: 36  KEIDIMLEDIA 4
           KEI++ML+D+A
Sbjct: 398 KEIELMLKDMA 408


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = -2

Query: 216 GARYVVLSNMLTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQASDKSHPQT 37
           GARYV+LSN+L DAN+WE+A +VRK+ME  GI KP GWS IE  G +HRF ASDKSHPQ 
Sbjct: 553 GARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQG 612

Query: 36  KEIDIMLEDIA 4
           KEI++ML+D+A
Sbjct: 613 KEIELMLKDMA 623


>ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Glycine max]
          Length = 613

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/70 (55%), Positives = 51/70 (72%)
 Frame = -2

Query: 216 GARYVVLSNMLTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQASDKSHPQT 37
           GARYV+LSNMLT  ++ ++A  VR+ ++  GI KP GWS +E NGTLH+F A DKSHP+ 
Sbjct: 523 GARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNGTLHKFLAGDKSHPEA 582

Query: 36  KEIDIMLEDI 7
           K  + ML DI
Sbjct: 583 KATEFMLRDI 592


>ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522901|gb|AET03355.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 633

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/70 (51%), Positives = 51/70 (72%)
 Frame = -2

Query: 216 GARYVVLSNMLTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQASDKSHPQT 37
           GA YV+LSNML+D ++ ++A  +RK ++  GI KP GWS +E N +LH+F A DKSHP+ 
Sbjct: 562 GAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEA 621

Query: 36  KEIDIMLEDI 7
           K  ++ML DI
Sbjct: 622 KTTELMLRDI 631


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -2

Query: 207 YVVLSNMLTDANRWEDAGRVRKLMEAKGISKPRGWSCIEANGTLHRFQASDKSHPQTKEI 28
           YVV+SN+  +A RWEDA RVRKLM+ +G+ K  GWS I  NG +H F A D++HPQ ++I
Sbjct: 348 YVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDI 407