BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041290
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...    82   5e-14
ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...    82   5e-14
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...    82   6e-14
ref|XP_002510221.1| chlorophyll A/B binding protein, putative [R...    82   6e-14
gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]          79   5e-13

>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 235 GRLAMVAMLGFFVQAYVTHAGPVDNLLTHLSDPWHRTLIQTLADSS 98
           GRLAMVAMLG FVQAYVTH GP+DNL+ HLS+PWH+T+IQTL+ SS
Sbjct: 213 GRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 258


>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -3

Query: 235 GRLAMVAMLGFFVQAYVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 95
           GRLAMVAM+G FVQA VTHAGP+DNL+ HLS+PWHRT+IQTLA+S S
Sbjct: 220 GRLAMVAMVGIFVQAAVTHAGPIDNLIEHLSNPWHRTIIQTLANSGS 266


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Glycine max]
          Length = 263

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -3

Query: 235 GRLAMVAMLGFFVQAYVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 95
           GRLAMVAMLG FVQA VTH GP+DNL+ HLS+PWH+T+IQTLA+SSS
Sbjct: 217 GRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 263


>ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223550922|gb|EEF52408.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 269

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 235 GRLAMVAMLGFFVQAYVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 95
           GRLAMVAMLG FVQA VTH GP+DNLL HLSDPWH+T+IQTL+ S+S
Sbjct: 223 GRLAMVAMLGIFVQAAVTHTGPIDNLLEHLSDPWHKTIIQTLSHSTS 269


>gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]
          Length = 256

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -3

Query: 235 GRLAMVAMLGFFVQAYVTHAGPVDNLLTHLSDPWHRTLIQTLADSSS 95
           GRLAM+AMLGFFVQA VTH GP+DNL+ HLS+PWH+T+IQTL  S+S
Sbjct: 210 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTLFTSTS 256