BLASTX nr result

ID: Coptis21_contig00041267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041267
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520334.1| metal transporter, putative [Ricinus communi...    58   9e-07
ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vi...    57   2e-06
ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu...    57   2e-06
gb|AFQ37304.1| natural resistance-associated macrophage protein ...    57   2e-06
emb|CBI18987.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002520334.1| metal transporter, putative [Ricinus communis]
           gi|223540553|gb|EEF42120.1| metal transporter, putative
           [Ricinus communis]
          Length = 528

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +2

Query: 173 TQKKSACRNFLSFVGPGFLVSLAYLDPGNLETD 271
           T +KS  R F+S+VGPGFLVSLAYLDPGNLETD
Sbjct: 32  THQKSGWRKFISYVGPGFLVSLAYLDPGNLETD 64


>ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vitis vinifera]
          Length = 544

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +2

Query: 179 KKSACRNFLSFVGPGFLVSLAYLDPGNLETD 271
           +K   RNFL+FVGPGFLVSLAYLDPGNLETD
Sbjct: 25  QKPGWRNFLAFVGPGFLVSLAYLDPGNLETD 55


>ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]
           gi|449499093|ref|XP_004160719.1| PREDICTED: metal
           transporter Nramp5-like [Cucumis sativus]
          Length = 549

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 173 TQKKSACRNFLSFVGPGFLVSLAYLDPGNLETD 271
           T +K   R FLS+VGPGFLVSLAYLDPGNLETD
Sbjct: 44  THQKPGWRKFLSYVGPGFLVSLAYLDPGNLETD 76


>gb|AFQ37304.1| natural resistance-associated macrophage protein 1 [Arachis
           hypogaea]
          Length = 545

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 152 VKMESENTQKKSACRNFLSFVGPGFLVSLAYLDPGNLETD 271
           +  ++ +  +K   + FLSF+GPGFLVSLAYLDPGNLETD
Sbjct: 34  IHADASSNHEKKGWKKFLSFIGPGFLVSLAYLDPGNLETD 73


>emb|CBI18987.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +2

Query: 182 KSACRNFLSFVGPGFLVSLAYLDPGNLETD 271
           K   RNFL+FVGPGFLVSLAYLDPGNLETD
Sbjct: 13  KPGWRNFLAFVGPGFLVSLAYLDPGNLETD 42


Top