BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041226
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16757.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...   100   9e-20
dbj|BAK05253.1| predicted protein [Hordeum vulgare subsp. vulgare]     97   1e-18
ref|XP_004133954.1| PREDICTED: sister chromatid cohesion protein...    96   2e-18
ref|XP_003562534.1| PREDICTED: sister chromatid cohesion protein...    96   2e-18

>emb|CBI16757.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  100 bits (250), Expect = 9e-20
 Identities = 62/114 (54%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
 Frame = -2

Query: 297 AVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXLPHLLNNRVTIRGNVEEDAVLCTPS 118
           AVLNL Q NSSISITY  +FGPH            LP +L+ RVT+RG   EDAVLCT S
Sbjct: 14  AVLNL-QPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCTQS 72

Query: 117 TTYALKFVGTSNSVFLIPPF---------------GDVEASVASVIKVAPGVME 1
            TY++KFVG SNSVFLIPP                 D +  VASVIKVAPG ME
Sbjct: 73  KTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNME 126


>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
           vinifera]
          Length = 397

 Score =  100 bits (250), Expect = 9e-20
 Identities = 62/114 (54%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
 Frame = -2

Query: 297 AVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXLPHLLNNRVTIRGNVEEDAVLCTPS 118
           AVLNL Q NSSISITY  +FGPH            LP +L+ RVT+RG   EDAVLCT S
Sbjct: 14  AVLNL-QPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCTQS 72

Query: 117 TTYALKFVGTSNSVFLIPPF---------------GDVEASVASVIKVAPGVME 1
            TY++KFVG SNSVFLIPP                 D +  VASVIKVAPG ME
Sbjct: 73  KTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNME 126


>dbj|BAK05253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 404

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/115 (49%), Positives = 67/115 (58%), Gaps = 16/115 (13%)
 Frame = -2

Query: 297 AVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXLPHLLNNRVTIRGNVEEDAVLCTPS 118
           AVL L    +S+S+ Y   FGPH            LP LL  RVT+RG  EE+AVLCTPS
Sbjct: 25  AVLGLTGAGASLSVCYHEAFGPHADLILLEAGDDLLPDLLQGRVTVRGRPEEEAVLCTPS 84

Query: 117 TTYALKFVGTSNSVFLIPPFGDVEASV----------------ASVIKVAPGVME 1
            TYA+KFVGTSNS+FLIPP   V AS+                AS+IKVAPG +E
Sbjct: 85  ATYAMKFVGTSNSMFLIPPGEAVAASLRPDHTNEDATVASDASASIIKVAPGSIE 139


>ref|XP_004133954.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Cucumis
           sativus] gi|449518342|ref|XP_004166201.1| PREDICTED:
           sister chromatid cohesion protein DCC1-like [Cucumis
           sativus]
          Length = 393

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/113 (52%), Positives = 66/113 (58%), Gaps = 14/113 (12%)
 Frame = -2

Query: 297 AVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXLPHLLNNRVTIRGNVEEDAVLCTPS 118
           AVLNL Q NSSISI Y + FGPH            L  +L+ RV+IRG  EEDAV CT S
Sbjct: 13  AVLNL-QPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCTKS 71

Query: 117 TTYALKFVGTSNSVFLIPPFG--------------DVEASVASVIKVAPGVME 1
            TY +K+VGTSNSV LIPP G              D    VA VIKVAPG+ME
Sbjct: 72  KTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIME 124


>ref|XP_003562534.1| PREDICTED: sister chromatid cohesion protein DCC1-like
           [Brachypodium distachyon]
          Length = 405

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 17/116 (14%)
 Frame = -2

Query: 297 AVLNLEQQNSSISITYDTNFGPHXXXXXXXXXXXXLPHLLNNRVTIRGNVEEDAVLCTPS 118
           AVL L    +S+S+ Y   FGPH            LP LL  RVT+RG  EE+AVLCTPS
Sbjct: 26  AVLGLAGDGASLSVCYHQAFGPHNDVILLEAADELLPDLLQGRVTVRGRPEEEAVLCTPS 85

Query: 117 TTYALKFVGTSNSVFLIPPFGDVEA-----------------SVASVIKVAPGVME 1
            TYA+KFVGTSNS+FLIPP G+  A                 +VAS+IKVAPG +E
Sbjct: 86  ATYAMKFVGTSNSMFLIPP-GEPAAPSLRPDHTNEDTSVATDAVASIIKVAPGSIE 140