BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041222
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              122   3e-26
emb|CCH50966.1| T4.5 [Malus x robusta]                                113   1e-23
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   111   7e-23
emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]   110   9e-23
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   110   9e-23

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/100 (59%), Positives = 74/100 (74%)
 Frame = -3

Query: 300  AAEIYWTCILLNDLKIPLEKPPLLWCDNISAISLSNNPIFHARTKHVEVDYHYVRELVTN 121
            AAE+ W   L  DL + L  P + WCDNIS+ISL++NP+FH+RTKH+EVDYHYVR+ V  
Sbjct: 1271 AAELSWLRSLFRDLNVFLSCPRI-WCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVR 1329

Query: 120  KLLDIKYVCTQDQTADVFTKGLATTRFQELITKLSVRTSP 1
            + L + YV T DQTAD+FTKGL+T RFQ L +KL VR  P
Sbjct: 1330 QELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARP 1369


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = -3

Query: 300  AAEIYWTCILLNDLKIPLEKPPLLWCDNISAISLSNNPIFHARTKHVEVDYHYVRELVTN 121
            AAEI W C +L+D+  PL K P+++CDN S I+L+ NP+FHARTKHVE+DYHY+RE V  
Sbjct: 1553 AAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLL 1612

Query: 120  KLLDIKYVCTQDQTADVFTKGLATTRFQELITKLSVRT 7
              + +++V +  Q AD+FTK LA  RF  L +KLSVR+
Sbjct: 1613 GHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSVRS 1650


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  111 bits (277), Expect = 7e-23
 Identities = 46/95 (48%), Positives = 71/95 (74%)
 Frame = -3

Query: 297  AEIYWTCILLNDLKIPLEKPPLLWCDNISAISLSNNPIFHARTKHVEVDYHYVRELVTNK 118
            AE+ W   +L +L + +++ P+LWCDN+ A  LS+NP+FHARTKH+E+DYH+V+E V NK
Sbjct: 1665 AELIWVRSVLEELGVKIDQSPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANK 1724

Query: 117  LLDIKYVCTQDQTADVFTKGLATTRFQELITKLSV 13
            +LDI+++ T+DQ AD FTK L+T   +  +  L++
Sbjct: 1725 MLDIRFIGTKDQIADGFTKALSTQNLRHFMYNLNL 1759


>emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]
          Length = 791

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/99 (49%), Positives = 74/99 (74%)
 Frame = -3

Query: 297 AEIYWTCILLNDLKIPLEKPPLLWCDNISAISLSNNPIFHARTKHVEVDYHYVRELVTNK 118
           AE+YW  +LL +L+I L+ PP++WCDNISA++L++NPIFHAR+KH++VDYH+V E V ++
Sbjct: 674 AEVYWLRMLLCELEISLDSPPVIWCDNISALALASNPIFHARSKHIKVDYHFVHEKVAHQ 733

Query: 117 LLDIKYVCTQDQTADVFTKGLATTRFQELITKLSVRTSP 1
            + ++++ T  Q AD+FTKG    RF  L  KL++   P
Sbjct: 734 DIILEHISTSIQPADIFTKGHTVDRFCFLRDKLAIYDLP 772


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/100 (51%), Positives = 72/100 (72%)
 Frame = -3

Query: 300 AAEIYWTCILLNDLKIPLEKPPLLWCDNISAISLSNNPIFHARTKHVEVDYHYVRELVTN 121
           AAE+ W   LL +L IPL +PP+L+CDN+S   L+ NPI H+R KHVE+DYH+VRE V  
Sbjct: 222 AAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQ 281

Query: 120 KLLDIKYVCTQDQTADVFTKGLATTRFQELITKLSVRTSP 1
           K LD++++ ++DQ AD+ TK L+T  F  L +KL+V + P
Sbjct: 282 KTLDVRFLPSEDQVADILTKSLSTQHFLHLRSKLTVLSRP 321