BLASTX nr result
ID: Coptis21_contig00041199
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00041199 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase... 165 3e-39 ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|2... 159 2e-37 emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera] 157 7e-37 ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis] ... 155 2e-36 ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase... 152 2e-35 >ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera] Length = 485 Score = 165 bits (418), Expect = 3e-39 Identities = 80/106 (75%), Positives = 89/106 (83%) Frame = +3 Query: 60 LIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIA 239 ++Q GR R+LKEG P GPVVYWMFRDQRL+DNWALIHAV+QANKANVPV IA Sbjct: 1 MVQQGRIRVLKEGSTP---SGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIA 57 Query: 240 FNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377 FNLFDQFLGAKARQLGFML+GLR LH L++TL IPFFLFQGEA+E Sbjct: 58 FNLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIE 103 >ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|222871087|gb|EEF08218.1| predicted protein [Populus trichocarpa] Length = 503 Score = 159 bits (402), Expect = 2e-37 Identities = 75/106 (70%), Positives = 90/106 (84%) Frame = +3 Query: 60 LIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIA 239 ++QPGR R++KEG + + GGGPVVYWMFRDQRL+DNWALIHAV+QAN++NVPV +A Sbjct: 13 IVQPGRIRVIKEGSRG----QVGGGPVVYWMFRDQRLQDNWALIHAVDQANRSNVPVAVA 68 Query: 240 FNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377 FNLFDQFLGAKARQLGFML+GL L + ++ETL IPFFLF GEA E Sbjct: 69 FNLFDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEE 114 >emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera] Length = 514 Score = 157 bits (398), Expect = 7e-37 Identities = 77/107 (71%), Positives = 86/107 (80%) Frame = +3 Query: 57 ALIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVI 236 +++Q GR R+LKEG P GPVVYWMFRDQRL+DNWALIHAV+QANKANVPV I Sbjct: 12 SMVQQGRIRVLKEGSTP---SGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAI 68 Query: 237 AFNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377 AFNLFDQFLGAKARQLGFML+GLR LH L++TL IPFFLFQ E Sbjct: 69 AFNLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQAYTFE 115 >ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis] gi|223549520|gb|EEF51008.1| DNA photolyase, putative [Ricinus communis] Length = 489 Score = 155 bits (393), Expect = 2e-36 Identities = 77/103 (74%), Positives = 84/103 (81%) Frame = +3 Query: 63 IQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIAF 242 IQPGR R+LKEG E GPV+YWMFRDQRL+DNWALIHAV+QANKANVPV +AF Sbjct: 8 IQPGRVRVLKEGL------EKQTGPVIYWMFRDQRLRDNWALIHAVDQANKANVPVAVAF 61 Query: 243 NLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEA 371 NLFDQFLGAKARQLGFMLKGLR L ++E L IPFFLFQG A Sbjct: 62 NLFDQFLGAKARQLGFMLKGLRLLQGKIEERLQIPFFLFQGAA 104 >ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus] gi|449517475|ref|XP_004165771.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus] gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase [Cucumis sativus] Length = 489 Score = 152 bits (385), Expect = 2e-35 Identities = 73/103 (70%), Positives = 86/103 (83%) Frame = +3 Query: 63 IQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIAF 242 +QP RFR+LK+G L GPVVYWMFRDQR+KDNWALIHAV++AN+ANVPV +AF Sbjct: 9 VQPCRFRVLKDGTGSL-------GPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVAF 61 Query: 243 NLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEA 371 NLFD+FLGAK+RQLGFML+GL+ L +QETL IPFFLFQGEA Sbjct: 62 NLFDRFLGAKSRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEA 104