BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041199
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   165   3e-39
ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]   157   7e-37
ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis] ...   155   2e-36
ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   152   2e-35

>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
          Length = 485

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = +3

Query: 60  LIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIA 239
           ++Q GR R+LKEG  P        GPVVYWMFRDQRL+DNWALIHAV+QANKANVPV IA
Sbjct: 1   MVQQGRIRVLKEGSTP---SGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIA 57

Query: 240 FNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377
           FNLFDQFLGAKARQLGFML+GLR LH  L++TL IPFFLFQGEA+E
Sbjct: 58  FNLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIE 103


>ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|222871087|gb|EEF08218.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/106 (70%), Positives = 90/106 (84%)
 Frame = +3

Query: 60  LIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIA 239
           ++QPGR R++KEG +     + GGGPVVYWMFRDQRL+DNWALIHAV+QAN++NVPV +A
Sbjct: 13  IVQPGRIRVIKEGSRG----QVGGGPVVYWMFRDQRLQDNWALIHAVDQANRSNVPVAVA 68

Query: 240 FNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377
           FNLFDQFLGAKARQLGFML+GL  L + ++ETL IPFFLF GEA E
Sbjct: 69  FNLFDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEE 114


>emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]
          Length = 514

 Score =  157 bits (398), Expect = 7e-37
 Identities = 77/107 (71%), Positives = 86/107 (80%)
 Frame = +3

Query: 57  ALIQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVI 236
           +++Q GR R+LKEG  P        GPVVYWMFRDQRL+DNWALIHAV+QANKANVPV I
Sbjct: 12  SMVQQGRIRVLKEGSTP---SGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAI 68

Query: 237 AFNLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEAVE 377
           AFNLFDQFLGAKARQLGFML+GLR LH  L++TL IPFFLFQ    E
Sbjct: 69  AFNLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQAYTFE 115


>ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis]
           gi|223549520|gb|EEF51008.1| DNA photolyase, putative
           [Ricinus communis]
          Length = 489

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/103 (74%), Positives = 84/103 (81%)
 Frame = +3

Query: 63  IQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIAF 242
           IQPGR R+LKEG       E   GPV+YWMFRDQRL+DNWALIHAV+QANKANVPV +AF
Sbjct: 8   IQPGRVRVLKEGL------EKQTGPVIYWMFRDQRLRDNWALIHAVDQANKANVPVAVAF 61

Query: 243 NLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEA 371
           NLFDQFLGAKARQLGFMLKGLR L   ++E L IPFFLFQG A
Sbjct: 62  NLFDQFLGAKARQLGFMLKGLRLLQGKIEERLQIPFFLFQGAA 104


>ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
           gi|449517475|ref|XP_004165771.1| PREDICTED:
           deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
           gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis
           sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase
           [Cucumis sativus]
          Length = 489

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/103 (70%), Positives = 86/103 (83%)
 Frame = +3

Query: 63  IQPGRFRILKEGCKPLLVQESGGGPVVYWMFRDQRLKDNWALIHAVEQANKANVPVVIAF 242
           +QP RFR+LK+G   L       GPVVYWMFRDQR+KDNWALIHAV++AN+ANVPV +AF
Sbjct: 9   VQPCRFRVLKDGTGSL-------GPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVAF 61

Query: 243 NLFDQFLGAKARQLGFMLKGLRHLHTSLQETLHIPFFLFQGEA 371
           NLFD+FLGAK+RQLGFML+GL+ L   +QETL IPFFLFQGEA
Sbjct: 62  NLFDRFLGAKSRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEA 104