BLASTX nr result

ID: Coptis21_contig00041174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041174
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634492.1| PREDICTED: squalene monooxygenase isoform 2 ...    71   1e-10
ref|XP_002886690.1| hypothetical protein ARALYDRAFT_475389 [Arab...    71   1e-10
ref|XP_002285493.1| PREDICTED: squalene monooxygenase isoform 1 ...    71   1e-10
emb|CAN60406.1| hypothetical protein VITISV_034139 [Vitis vinifera]    71   1e-10
gb|ACJ05633.1| squalene epoxidase 1 [Nigella sativa]                   70   1e-10

>ref|XP_003634492.1| PREDICTED: squalene monooxygenase isoform 2 [Vitis vinifera]
          Length = 514

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 320 GASGIIFPIIKAEGFRQMFFPATVPAYYRAPPVK 219
           GASGIIFPIIKAEG RQMFFPATVPAYYRAPPVK
Sbjct: 481 GASGIIFPIIKAEGVRQMFFPATVPAYYRAPPVK 514


>ref|XP_002886690.1| hypothetical protein ARALYDRAFT_475389 [Arabidopsis lyrata subsp.
           lyrata] gi|297332531|gb|EFH62949.1| hypothetical protein
           ARALYDRAFT_475389 [Arabidopsis lyrata subsp. lyrata]
          Length = 530

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 320 GASGIIFPIIKAEGFRQMFFPATVPAYYRAPPVK 219
           GASGIIFPIIKAEG RQMFFPATVPAYYRAPPVK
Sbjct: 491 GASGIIFPIIKAEGVRQMFFPATVPAYYRAPPVK 524


>ref|XP_002285493.1| PREDICTED: squalene monooxygenase isoform 1 [Vitis vinifera]
           gi|302142152|emb|CBI19355.3| unnamed protein product
           [Vitis vinifera]
          Length = 523

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 320 GASGIIFPIIKAEGFRQMFFPATVPAYYRAPPVK 219
           GASGIIFPIIKAEG RQMFFPATVPAYYRAPPVK
Sbjct: 490 GASGIIFPIIKAEGVRQMFFPATVPAYYRAPPVK 523


>emb|CAN60406.1| hypothetical protein VITISV_034139 [Vitis vinifera]
          Length = 175

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 320 GASGIIFPIIKAEGFRQMFFPATVPAYYRAPPVK 219
           GASGIIFPIIKAEG RQMFFPATVPAYYRAPPVK
Sbjct: 142 GASGIIFPIIKAEGVRQMFFPATVPAYYRAPPVK 175


>gb|ACJ05633.1| squalene epoxidase 1 [Nigella sativa]
          Length = 521

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 320 GASGIIFPIIKAEGFRQMFFPATVPAYYRAPPVK 219
           GASGIIFPIIKAEGFRQMFFPATVPAYYRA PVK
Sbjct: 488 GASGIIFPIIKAEGFRQMFFPATVPAYYRAAPVK 521


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