BLASTX nr result

ID: Coptis21_contig00041162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041162
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein ...   107   2e-21
ref|XP_003601496.1| Membrane protein, putative [Medicago truncat...   103   3e-20
ref|NP_193004.2| uncharacterized protein [Arabidopsis thaliana] ...   101   7e-20
emb|CAB40985.1| putative protein [Arabidopsis thaliana] gi|72679...   101   7e-20
ref|XP_003601502.1| Membrane protein, putative [Medicago truncat...   100   2e-19

>ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 580

 Score =  107 bits (266), Expect = 2e-21
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +3

Query: 9   NETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTFRRRFRNLVKVLYVEAIE 188
           NE PE+W++T FPSDD V+RAQLQAIIRRLQGIVASM+R+PTFRRRFRNL+KVLY+EA++
Sbjct: 483 NELPEEWDSTGFPSDDTVRRAQLQAIIRRLQGIVASMSRMPTFRRRFRNLIKVLYIEALQ 542

Query: 189 RVALACQDGG 218
             A A   GG
Sbjct: 543 AGASASHIGG 552


>ref|XP_003601496.1| Membrane protein, putative [Medicago truncatula]
           gi|355490544|gb|AES71747.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 557

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/71 (69%), Positives = 63/71 (88%)
 Frame = +3

Query: 9   NETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTFRRRFRNLVKVLYVEAIE 188
           N+ PEDW++T FPS DNV+RAQLQAIIRRLQGIV+SM+R+PTFRR+FRNLVK+LY+EA++
Sbjct: 484 NDIPEDWDSTGFPSKDNVRRAQLQAIIRRLQGIVSSMSRMPTFRRKFRNLVKILYIEALQ 543

Query: 189 RVALACQDGGN 221
             A A ++G N
Sbjct: 544 ASASA-KEGNN 553


>ref|NP_193004.2| uncharacterized protein [Arabidopsis thaliana]
           gi|71905515|gb|AAZ52735.1| expressed protein
           [Arabidopsis thaliana] gi|332657762|gb|AEE83162.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 575

 Score =  101 bits (252), Expect = 7e-20
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +3

Query: 9   NETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTFRRRFRNLVKVLYVEAIE 188
           NE  EDW+NT FPS D V++AQLQAIIRRLQG+VASM+RIPTFRRRF NLVKVLY+EA+E
Sbjct: 483 NERTEDWDNTGFPSSDTVRKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALE 542

Query: 189 RVALACQDGG 218
             A   + GG
Sbjct: 543 MGASGNRAGG 552


>emb|CAB40985.1| putative protein [Arabidopsis thaliana] gi|7267969|emb|CAB78310.1|
           putative protein [Arabidopsis thaliana]
          Length = 590

 Score =  101 bits (252), Expect = 7e-20
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +3

Query: 9   NETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTFRRRFRNLVKVLYVEAIE 188
           NE  EDW+NT FPS D V++AQLQAIIRRLQG+VASM+RIPTFRRRF NLVKVLY+EA+E
Sbjct: 498 NERTEDWDNTGFPSSDTVRKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALE 557

Query: 189 RVALACQDGG 218
             A   + GG
Sbjct: 558 MGASGNRAGG 567


>ref|XP_003601502.1| Membrane protein, putative [Medicago truncatula]
           gi|355490550|gb|AES71753.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 580

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/71 (67%), Positives = 62/71 (87%)
 Frame = +3

Query: 9   NETPEDWNNTRFPSDDNVKRAQLQAIIRRLQGIVASMTRIPTFRRRFRNLVKVLYVEAIE 188
           N+ PEDW++T FPS DNV+RAQLQAIIRRLQGI +SM+R+PTFRR+FRNLVK+LY+EA++
Sbjct: 507 NDIPEDWDSTGFPSKDNVRRAQLQAIIRRLQGIGSSMSRMPTFRRKFRNLVKILYIEALQ 566

Query: 189 RVALACQDGGN 221
             A A ++G N
Sbjct: 567 ASASA-KEGNN 576


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