BLASTX nr result
ID: Coptis21_contig00041159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00041159 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ... 82 6e-14 ref|XP_002527430.1| conserved hypothetical protein [Ricinus comm... 79 5e-13 gb|ABK21638.1| unknown [Picea sitchensis] 79 5e-13 ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1... 77 2e-12 ref|XP_002301844.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 >ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis vinifera] gi|297734866|emb|CBI17100.3| unnamed protein product [Vitis vinifera] Length = 134 Score = 81.6 bits (200), Expect = 6e-14 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%) Frame = +1 Query: 1 KLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTE-QGHFILDDGSGII 177 K++ GQL+ A+++ SQ+ A TL G+LFQRAWLQG+LVS S + QG F+LDDG+G+I Sbjct: 9 KVMCGQLRKAKETTSQN-----AFTLGGVLFQRAWLQGVLVSVSDDAQGRFVLDDGTGVI 63 Query: 178 ELSLSNEFRQRNW 216 LSLS +F RNW Sbjct: 64 HLSLSGDFLHRNW 76 >ref|XP_002527430.1| conserved hypothetical protein [Ricinus communis] gi|223533165|gb|EEF34922.1| conserved hypothetical protein [Ricinus communis] Length = 103 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/72 (61%), Positives = 53/72 (73%) Frame = +1 Query: 1 KLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFILDDGSGIIE 180 KLL QLK+AR++ SQ+ ALTL GILFQRAWLQGILV + G+ ILDDG+G+I Sbjct: 9 KLLCVQLKDARETSSQN-----ALTLGGILFQRAWLQGILVFNDGD-GNLILDDGTGVIH 62 Query: 181 LSLSNEFRQRNW 216 LSLS +FR R W Sbjct: 63 LSLSGDFRLRRW 74 >gb|ABK21638.1| unknown [Picea sitchensis] Length = 88 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%) Frame = +1 Query: 1 KLLSGQLKNARQSQS-QDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFILDDGSGII 177 KL + QLKNAR S S Q ++ SA+TL +LFQRAWLQG+LV+ TEQG ILDDGS II Sbjct: 9 KLFAAQLKNARPSPSTQITAGGSAMTLGTLLFQRAWLQGVLVA-VTEQGRLILDDGSSII 67 Query: 178 ELSLSNEFRQRNW 216 EL L +F+Q+ W Sbjct: 68 ELLLPKDFQQQQW 80 >ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1| unknown [Populus trichocarpa] gi|222837597|gb|EEE75962.1| predicted protein [Populus trichocarpa] Length = 134 Score = 76.6 bits (187), Expect = 2e-12 Identities = 43/72 (59%), Positives = 53/72 (73%) Frame = +1 Query: 1 KLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFILDDGSGIIE 180 KLL QLK+A ++ SQ+ ALTL GILFQRAWLQGILVS + G +LDDG+G+IE Sbjct: 9 KLLCVQLKDASETPSQN-----ALTLGGILFQRAWLQGILVSNDGD-GRLLLDDGTGVIE 62 Query: 181 LSLSNEFRQRNW 216 L LS +FR R+W Sbjct: 63 LCLSPDFRLRHW 74 >ref|XP_002301844.1| predicted protein [Populus trichocarpa] gi|222843570|gb|EEE81117.1| predicted protein [Populus trichocarpa] Length = 205 Score = 75.9 bits (185), Expect = 3e-12 Identities = 42/72 (58%), Positives = 52/72 (72%) Frame = +1 Query: 1 KLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFILDDGSGIIE 180 KLL QLK+ ++ SQ+ ALTL GILFQRAWLQGILVS + G +LDDG+G+IE Sbjct: 28 KLLRVQLKDTSETPSQN-----ALTLGGILFQRAWLQGILVSNDGD-GRLLLDDGTGVIE 81 Query: 181 LSLSNEFRQRNW 216 L LS +FR R+W Sbjct: 82 LCLSGDFRLRHW 93