BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041155
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24015.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  206 bits (525), Expect = 1e-51
 Identities = 93/114 (81%), Positives = 109/114 (95%)
 Frame = -1

Query: 350 GVNEFIAGGRGHPQAKEIYAKVDEMLERMKCAGYVPNTDGVLHDVEEEDRENPLHYHSEK 171
           GV+EFIAGGR HPQAKEIYAK+DE+LE ++  GYVP+TDGVLHD++EE++ENPL+YHSEK
Sbjct: 445 GVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEK 504

Query: 170 LAIAFGLLKTKPGATIRISKNLRVCRDCHQASKLISKIFDREIIVRDRNRFHHF 9
           LAIAFGLLKTKPG T+RISKNLR+CRDCHQASKLISK++DREII+RDRNRFHHF
Sbjct: 505 LAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHF 558


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  206 bits (525), Expect = 1e-51
 Identities = 93/114 (81%), Positives = 109/114 (95%)
 Frame = -1

Query: 350 GVNEFIAGGRGHPQAKEIYAKVDEMLERMKCAGYVPNTDGVLHDVEEEDRENPLHYHSEK 171
           GV+EFIAGGR HPQAKEIYAK+DE+LE ++  GYVP+TDGVLHD++EE++ENPL+YHSEK
Sbjct: 500 GVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEK 559

Query: 170 LAIAFGLLKTKPGATIRISKNLRVCRDCHQASKLISKIFDREIIVRDRNRFHHF 9
           LAIAFGLLKTKPG T+RISKNLR+CRDCHQASKLISK++DREII+RDRNRFHHF
Sbjct: 560 LAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHF 613


>ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 607

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/116 (71%), Positives = 103/116 (88%)
 Frame = -1

Query: 353 GGVNEFIAGGRGHPQAKEIYAKVDEMLERMKCAGYVPNTDGVLHDVEEEDRENPLHYHSE 174
           G VNEF+AGGR HP A+ IYAK+ EMLE ++  G+VP+TDGVLHD+ EE+RENPL YHSE
Sbjct: 482 GVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSE 541

Query: 173 KLAIAFGLLKTKPGATIRISKNLRVCRDCHQASKLISKIFDREIIVRDRNRFHHFS 6
           KLAIA+GLLKTK G T+R++KNLRVC+DCHQASK+ISK++D +II+RDR+RFHHFS
Sbjct: 542 KLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFS 597


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/118 (71%), Positives = 95/118 (80%), Gaps = 3/118 (2%)
 Frame = -1

Query: 353 GGVNEFIAGGRGHPQAKEIYAKVDEMLERMKCAGYVPNTDGVLHDV---EEEDRENPLHY 183
           G V+EFIAG R HPQAKE++AKV EMLE +K  GYV +T+GVLH     EEED ENPL+Y
Sbjct: 504 GTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYY 563

Query: 182 HSEKLAIAFGLLKTKPGATIRISKNLRVCRDCHQASKLISKIFDREIIVRDRNRFHHF 9
           HSEKLAIAFGL +TKPG T+RI KNLR+C DCH A KLIS +FDREIIVRDR RFH F
Sbjct: 564 HSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRF 621


>ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Brachypodium distachyon]
          Length = 599

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/115 (63%), Positives = 94/115 (81%)
 Frame = -1

Query: 353 GGVNEFIAGGRGHPQAKEIYAKVDEMLERMKCAGYVPNTDGVLHDVEEEDRENPLHYHSE 174
           G V EF  G   H Q KEI+A V +M+ +++  GY+P+T  VLHD+ EE++E PL YHSE
Sbjct: 474 GEVCEFQCGSLCHAQEKEIFAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSE 533

Query: 173 KLAIAFGLLKTKPGATIRISKNLRVCRDCHQASKLISKIFDREIIVRDRNRFHHF 9
           KLAIAFGLL+T+PG T+RI+KNLRVCRDCH+A+K IS++F+REI+VRDRNRFHHF
Sbjct: 534 KLAIAFGLLRTRPGDTVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHF 588