BLASTX nr result

ID: Coptis21_contig00041108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041108
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 ...   100   1e-19
gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thali...    89   4e-16
ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana] ...    89   4e-16
ref|XP_003532944.1| PREDICTED: protein RRNAD1-like [Glycine max]       89   5e-16
ref|XP_002529955.1| protein with unknown function [Ricinus commu...    89   5e-16

>ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 homolog [Vitis
           vinifera] gi|296082802|emb|CBI21807.3| unnamed protein
           product [Vitis vinifera]
          Length = 546

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = -1

Query: 210 DVRIQPPSCDIPNLKSSLVLAGLHACGDLSVTMLRTFLDCEEIKAVISIGCCYNLLSDEG 31
           D R  P  CD+ N +SS VLAGLHACGDLSVTMLRTFL+C+E+KAV+SIGCCYNLLS+E 
Sbjct: 257 DKRRLPSLCDVHN-ESSFVLAGLHACGDLSVTMLRTFLECKEVKAVVSIGCCYNLLSEEV 315

Query: 30  FENVSSQRGF 1
            E+ SSQ GF
Sbjct: 316 CESSSSQCGF 325


>gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thaliana]
          Length = 489

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 NLKSSLVLAGLHACGDLSVTMLRTFLDCEEIKAVISIGCCYNLLSDEGFENVSSQRGF 1
           N   SLVLAGLHACGDLSVTMLRTF++CEE+KA++SIGCCYNLLS++  E+  S+ G+
Sbjct: 265 NRSCSLVLAGLHACGDLSVTMLRTFMECEEVKALVSIGCCYNLLSEKSSEDSCSKCGY 322


>ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana]
           gi|190016010|gb|ACE62893.1| At1g16650 [Arabidopsis
           thaliana] gi|332191359|gb|AEE29480.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 521

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = -1

Query: 174 NLKSSLVLAGLHACGDLSVTMLRTFLDCEEIKAVISIGCCYNLLSDEGFENVSSQRGF 1
           N   SLVLAGLHACGDLSVTMLRTF++CEE+KA++SIGCCYNLLS++  E+  S+ G+
Sbjct: 257 NRSCSLVLAGLHACGDLSVTMLRTFMECEEVKALVSIGCCYNLLSEKSSEDSCSKCGY 314


>ref|XP_003532944.1| PREDICTED: protein RRNAD1-like [Glycine max]
          Length = 563

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/58 (67%), Positives = 51/58 (87%)
 Frame = -1

Query: 174 NLKSSLVLAGLHACGDLSVTMLRTFLDCEEIKAVISIGCCYNLLSDEGFENVSSQRGF 1
           N K S+VLAGLHACGDLSVTML+TF++C+++KAV+S+GCCYNLLS+E  ++  SQ GF
Sbjct: 258 NKKPSIVLAGLHACGDLSVTMLKTFVECKDVKAVVSLGCCYNLLSEEMIKDGESQFGF 315


>ref|XP_002529955.1| protein with unknown function [Ricinus communis]
           gi|223530553|gb|EEF32432.1| protein with unknown
           function [Ricinus communis]
          Length = 538

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = -1

Query: 168 KSSLVLAGLHACGDLSVTMLRTFLDCEEIKAVISIGCCYNLLSDEGFENVSSQRGF 1
           K+S VLAGLHACGDLSVTML+TFL+C+E+KAV+SIGCCYNLLS+E  +   S  GF
Sbjct: 245 KTSFVLAGLHACGDLSVTMLKTFLECKEVKAVVSIGCCYNLLSEECLDAADSHCGF 300


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