BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041105
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]   136   2e-30
ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
emb|CBI15896.3| unnamed protein product [Vitis vinifera]              133   1e-29

>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/102 (61%), Positives = 82/102 (80%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           +TYN+L+KI VKK +F +AK L DWM    ++PD++SYGTVING+VK+G L   LE+FDE
Sbjct: 150 QTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDE 209

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
           MF RG++PDV+CYNI+IDGFFK GD+V+  EIWERL + S V
Sbjct: 210 MFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCV 251



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/99 (36%), Positives = 63/99 (63%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TYNV++    K   F+++ E+++ M+ N  E DLF+Y ++I GL   G +   +E++ EM
Sbjct: 257 TYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRES 12
             R ++ DVV YN L++GF +AG   ++ E+W  +G+E+
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN 355



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/101 (30%), Positives = 55/101 (54%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           +YN L+  +++ N  EKA+    +    GI P+L +Y  +I   VK  +  +   + D M
Sbjct: 116 SYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWM 175

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
           + + + PDV  Y  +I+G  K+GD V A+E+++ +    LV
Sbjct: 176 WSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/83 (34%), Positives = 44/83 (53%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           T+N L+    K  E E A  ++  M  NG +PD+ SY   + GL   G++ DG+ +FD+ 
Sbjct: 606 THNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDA 665

Query: 128 FIRGILPDVVCYNILIDGFFKAG 60
              GILP  + + IL+    K G
Sbjct: 666 LKNGILPTSITWYILVRAVLKLG 688



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/93 (30%), Positives = 48/93 (51%)
 Frame = -3

Query: 302 NVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFI 123
           N L+  +V+ ++ E+A   F  M   G  P + SY T+INGL K  +  D      EM  
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 122 RGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
           +   PD++ Y++L+DG  +      A+ +W ++
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQV 560


>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
           gi|449516585|ref|XP_004165327.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/102 (61%), Positives = 78/102 (76%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           +TYN+L+KI  KK +FEK K L  WM  NG+ PD+ SYGT+IN L K+G L D +E+FDE
Sbjct: 150 QTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDE 209

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
           M +RG+ PDV+CYNILIDGF + GDFVKA EIW+RL  ES V
Sbjct: 210 MSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/100 (32%), Positives = 58/100 (58%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           ETYN+++    K  + +++ E+++ M+ N   PDLF++ ++I+GL K G      ++F E
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRES 12
           M   G+ PDV  YN ++ G F+ G   K  E+W  + + +
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/95 (31%), Positives = 57/95 (60%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TY++L+    +  + + A  L+       ++PDL  +  +I+GL    K+   LE+F +M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
                +PD+V +N +++G +KAGD V+A++IW+R+
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRI 630



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -3

Query: 305 YNVLVKIYVKKNEFEKAKELFDWMR---GNGIEPDLFSYGTVINGLVKNGKLFDGLEMFD 135
           YN+L+  +++K +F KA E+  W R    + + P + +Y  +INGL K GKL + +EM++
Sbjct: 222 YNILIDGFLRKGDFVKANEI--WKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWN 279

Query: 134 EMFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
            M      PD+  ++ +I G  KAG+F  A ++++ +
Sbjct: 280 RMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM 316



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/93 (31%), Positives = 48/93 (51%)
 Frame = -3

Query: 305 YNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMF 126
           +N L+  YV+  + E+A  +   M+     P + SY T+INGL K  +  D      EM 
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526

Query: 125 IRGILPDVVCYNILIDGFFKAGDFVKAVEIWER 27
             G+ PD++ Y++LIDG  +      A+ +W +
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQ 559


>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           +TYN+L+KI  +K +F+KAKEL +WM G G  PD+FSYGT+IN L KNG + D L++FDE
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
           M  RG+ PDV CYNILIDGFFK GD + A EIWERL
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 220



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/98 (32%), Positives = 61/98 (62%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           +YNV++    K  +F+++ E++  M+ N    DL++Y T+I+GL  +G L     ++ EM
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRE 15
              G+ PDVV YN +++G+ +AG   + +E+W+ + +E
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/95 (31%), Positives = 58/95 (61%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TY++L+    +  + + A  L+      G +PD+  +  +I+GL  +GK+ D L+++ EM
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
             R  +P++V +N L++GF+K  DF +A +IW+ +
Sbjct: 571 KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 605



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           T+N L++ + K  +FE+A +++D +   G++PD+ SY   + GL    ++ D +   ++ 
Sbjct: 581 THNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDA 640

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAV 42
             RG+LP  + +NIL+ G+     +++ V
Sbjct: 641 VDRGVLPTAITWNILVQGYLALKGYMEPV 669



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/95 (33%), Positives = 51/95 (53%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TY+ L+         + A  ++  M  NG+ PD+  Y T++NG ++ G++ + LE++  M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
              G    VV YNILI G F+     +A+ IWE L
Sbjct: 327 EKEGCRT-VVSYNILIRGLFENAKVDEAISIWELL 360



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = -3

Query: 305 YNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMF 126
           Y+ ++    ++   ++   + D M  +G +P+ +    VING V+  KL D L  F  M 
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMV 466

Query: 125 IRGILPDVVCYNILIDGFFKAGDFVKA 45
            +G  P VV YN LI+G  KA  F +A
Sbjct: 467 SKGCFPTVVTYNTLINGLSKAERFSEA 493



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/101 (28%), Positives = 52/101 (51%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TYN L+    K   F +A  L   M   G +P++ +Y  ++NGL +  KL   L ++ + 
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
             +G  PDV  +NI+I G   +G    A++++  + + + V
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCV 576


>ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/102 (62%), Positives = 77/102 (75%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           ETYNVL+K+  KK EFEK + L  WM G G+ PD  +YGT+I G+ K+G L   LE+FDE
Sbjct: 149 ETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDE 208

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
           M  RG+ PDVVCYN++IDGFFK GDFVKA E+WERL RE LV
Sbjct: 209 MRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELV 250



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/100 (36%), Positives = 62/100 (62%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           +YNV++    K   F +  E+++ M+ N  + DLF+Y  +I+GL + G L    ++++EM
Sbjct: 256 SYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEM 315

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESL 9
             RG+ PDVV  N +++G  KAG+  +  E+WE +G+ SL
Sbjct: 316 VGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL 355



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/92 (29%), Positives = 52/92 (56%)
 Frame = -3

Query: 302 NVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFI 123
           NVL+  +VK ++ + A ++F  M G G    + SY  +INGL++  +  +  +  +EM  
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524

Query: 122 RGILPDVVCYNILIDGFFKAGDFVKAVEIWER 27
           +G  PD++ Y+ LI G +++     A+ +W +
Sbjct: 525 KGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/101 (25%), Positives = 54/101 (53%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           +YN+L+   ++   F +A +  + M   G +PD+ +Y T+I GL ++  +   L ++ + 
Sbjct: 498 SYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQF 557

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
              G  PD++ YNI+I     +G    A++++  L ++  V
Sbjct: 558 LDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV 598


>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/96 (62%), Positives = 74/96 (77%)
 Frame = -3

Query: 311 ETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDE 132
           +TYN+L+KI  +K +F+KAKEL +WM   G  PD+FSYGT+IN L KNG + D L++FDE
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 131 MFIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
           M  RG+ PDV CYNILIDGFFK GD + A EIWERL
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/98 (32%), Positives = 61/98 (62%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           +YNV++    K  +F+++ E++  M+ N    DL++Y T+I+GL  +G L     ++ EM
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 316

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRE 15
              G+ PDVV YN +++G+ +AG   + +E+W+ + +E
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/95 (31%), Positives = 58/95 (61%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TY++L+    +  + + A  L+      G +PD+  +  +I+GL  +GK+ D L+++ EM
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
             R  +P++V +N L++GF+K  DF +A +IW+ +
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/95 (33%), Positives = 51/95 (53%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TY+ L+         + A  ++  M  NG+ PD+  Y T++NG ++ G++ + LE++  M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERL 24
              G    VV YNILI G F+     +A+ IWE L
Sbjct: 352 EKEGCRT-VVSYNILIRGLFENAKVDEAISIWELL 385



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/101 (28%), Positives = 51/101 (50%)
 Frame = -3

Query: 308 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 129
           TYN L+    K   F +A  L   M   G +P++ +Y  ++NGL +  KL   L ++ + 
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560

Query: 128 FIRGILPDVVCYNILIDGFFKAGDFVKAVEIWERLGRESLV 6
             +G  PDV  +NI+I G   +G    A++++  + +   V
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601