BLASTX nr result

ID: Coptis21_contig00041103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041103
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283196.1| PREDICTED: G-type lectin S-receptor-like ser...    87   1e-15
emb|CAN84024.1| hypothetical protein VITISV_004993 [Vitis vinifera]    87   1e-15
emb|CBI16446.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_004168531.1| PREDICTED: G-type lectin S-receptor-like ser...    85   5e-15
ref|XP_004142234.1| PREDICTED: G-type lectin S-receptor-like ser...    85   5e-15

>ref|XP_002283196.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1 [Vitis vinifera]
          Length = 427

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 63/85 (74%)
 Frame = -2

Query: 266 ALNSSRVANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDF 87
           A+ +S+V+ AA+LDTGN VL + +S  LWESFD+PTDT+LP Q L +G++L +R +E+++
Sbjct: 114 AVYASKVSYAAMLDTGNFVLASQDSIYLWESFDHPTDTILPTQMLDLGSQLVARFSEKNY 173

Query: 86  TTGRFEFILRDDGNLSFRPIARPTE 12
           + GRF  IL+ DG+L     A PT+
Sbjct: 174 SNGRFLLILQADGDLILYTTAFPTD 198


>emb|CAN84024.1| hypothetical protein VITISV_004993 [Vitis vinifera]
          Length = 1049

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 63/85 (74%)
 Frame = -2

Query: 266 ALNSSRVANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDF 87
           A+ +S+V+ AA+LDTGN VL + +S  LWESFD+PTDT+LP Q L +G++L +R +E+++
Sbjct: 114 AVYASKVSYAAMLDTGNFVLASQDSIYLWESFDHPTDTILPTQMLDLGSQLVARFSEKNY 173

Query: 86  TTGRFEFILRDDGNLSFRPIARPTE 12
           + GRF  IL+ DG+L     A PT+
Sbjct: 174 SNGRFLLILQADGDLILYTTAFPTD 198


>emb|CBI16446.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/80 (51%), Positives = 59/80 (73%)
 Frame = -2

Query: 257 SSRVANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDFTTG 78
           S  V++AA+LDTGN VL + +ST+LWESF++PTDT+LP Q L  G KL +R ++  +++G
Sbjct: 735 SPGVSHAAMLDTGNFVLASQDSTLLWESFNHPTDTILPTQILNQGGKLVARISDMSYSSG 794

Query: 77  RFEFILRDDGNLSFRPIARP 18
           RF F L+DDGNL  + +  P
Sbjct: 795 RFLFTLQDDGNLGNQRVPCP 814



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = -2

Query: 263 LNSSRVANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDFT 84
           LNS+ VA AA+LDTGN VL    ST LW+SF++PTDT+LP Q L   +KL +R +E +++
Sbjct: 197 LNSTGVAYAAMLDTGNFVLAGHNSTYLWQSFNHPTDTILPTQILNQDSKLVARFSEVNYS 256

Query: 83  TGRFEFILRDDGNLSFRPIARPTE 12
           +GRF  IL+ DGNL    I  P +
Sbjct: 257 SGRFMLILQTDGNLVLYTIDFPMD 280


>ref|XP_004168531.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Cucumis sativus]
          Length = 832

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -2

Query: 260 NSSR-VANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDFT 84
           NS+R V+ AA+LD+GN VL  A+S ILW+SFD PTDT+LP+Q L +G  L +R +E  + 
Sbjct: 153 NSNRSVSYAAMLDSGNFVLAAADSEILWQSFDVPTDTILPSQTLNMGGTLVARYSESTYK 212

Query: 83  TGRFEFILRDDGNLSFRPIARPTE 12
           +GRF+ +++ DGNL   P A P +
Sbjct: 213 SGRFQLVMQTDGNLVIYPRAFPLD 236


>ref|XP_004142234.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Cucumis sativus]
          Length = 768

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -2

Query: 260 NSSR-VANAALLDTGNLVLTTAESTILWESFDNPTDTLLPNQKLAIGNKLSSRRTEEDFT 84
           NS+R V+ AA+LD+GN VL  A+S ILW+SFD PTDT+LP+Q L +G  L +R +E  + 
Sbjct: 89  NSNRSVSYAAMLDSGNFVLAAADSEILWQSFDVPTDTILPSQTLNMGGTLVARYSESTYK 148

Query: 83  TGRFEFILRDDGNLSFRPIARPTE 12
           +GRF+ +++ DGNL   P A P +
Sbjct: 149 SGRFQLVMQTDGNLVIYPRAFPLD 172


Top