BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041098
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii...    82   5e-14
gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii...    82   5e-14
gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii...    82   5e-14
gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii...    82   5e-14
gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba...    82   5e-14

>gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 91  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 123



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 166

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 167 LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 199


>gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 98  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 157

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 158 LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 190



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIYGMHIFVISLTGKKLKLEVL 90
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+LI     FV +LTGK + LEV 
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLI-----FVKTLTGKTITLEVE 85

Query: 89  SSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 86  SSDTIENVKQKIQDKEGIPPDQQRLIFAG 114


>gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 153

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 91  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 123


>gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
           gi|440792103|gb|ELR13331.1| polyubiquitin, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 91  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 123



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIYGMHIFVISLTGKKLKLEVL 90
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+LI     FV +LTGK + LEV 
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLI-----FVKTLTGKTITLEVE 161

Query: 89  SSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 162 SSDTIENVKQKIQDKEGIPPDQQRLIFAG 190


>gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 224

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 269 ESMEGIKADRQRLYFGDVKLENDANLADLNIPQGQTLNLIY----GMHIFVISLTGKKLK 102
           +  EGI  D+QRL F   +LE+   LAD NI +  TL+L+     GM IFV +LTGK + 
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 90

Query: 101 LEVLSSDTGKGVKKMVHQLEGIPPKQQRLIVNG 3
           LEV SSDT + VK+ +   EGIPP QQRLI  G
Sbjct: 91  LEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 123