BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041073
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...   113   2e-23
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    112   3e-23
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = -1

Query: 220 LSACSHGGLMEKGSKFFESMTRGYLIRPTVQHYTCMVDLLGHSGRLDEAYDLIMNMPVRP 41
           LSACSHGGL+E+G  FFE+M R Y I PTVQHYTCMVDLLGHSGRLDEAY+LIM M V P
Sbjct: 384 LSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLP 443

Query: 40  DSGVWGALLNSCK 2
           DSGVWGALLNSCK
Sbjct: 444 DSGVWGALLNSCK 456


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = -1

Query: 220 LSACSHGGLMEKGSKFFESMTRGYLIRPTVQHYTCMVDLLGHSGRLDEAYDLIMNMPVRP 41
           LSACSHGGL+E+G  FFE+M R Y I PTVQHYTCMVDLLGHSGRLDEAY+LIM M V P
Sbjct: 286 LSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLP 345

Query: 40  DSGVWGALLNSCK 2
           DSGVWGALLNSCK
Sbjct: 346 DSGVWGALLNSCK 358


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/73 (69%), Positives = 59/73 (80%)
 Frame = -1

Query: 220 LSACSHGGLMEKGSKFFESMTRGYLIRPTVQHYTCMVDLLGHSGRLDEAYDLIMNMPVRP 41
           L+ACS G L+++G   +  M R Y I PTVQHYTCM+DLLGH G+LDEAYDLI NM V+P
Sbjct: 356 LAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKP 415

Query: 40  DSGVWGALLNSCK 2
           DSGVWGALLNSCK
Sbjct: 416 DSGVWGALLNSCK 428


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  112 bits (280), Expect = 3e-23
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = -1

Query: 220 LSACSHGGLMEKGSKFFESMTRGYLIRPTVQHYTCMVDLLGHSGRLDEAYDLIMNMPVRP 41
           LSAC+HGG++E+  +FF  M   Y I+PTVQHYTC++D+LGH+GR +EAYDLI  M + P
Sbjct: 373 LSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEP 432

Query: 40  DSGVWGALLNSCK 2
           DSG+WGALLN CK
Sbjct: 433 DSGIWGALLNGCK 445


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  110 bits (276), Expect = 9e-23
 Identities = 46/73 (63%), Positives = 61/73 (83%)
 Frame = -1

Query: 220 LSACSHGGLMEKGSKFFESMTRGYLIRPTVQHYTCMVDLLGHSGRLDEAYDLIMNMPVRP 41
           LSAC+HGG++++  +FF  M   Y I+PTVQH+TC+VD+LGH+GR +EAYDLI  MP++P
Sbjct: 373 LSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQP 432

Query: 40  DSGVWGALLNSCK 2
           DSG+WGALLN CK
Sbjct: 433 DSGIWGALLNGCK 445