BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041072
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU25941.1| cytochrome b [Vitis vinifera]                          137   9e-31
gb|AAB51379.1| apocytochrome b [Nicotiana tabacum]                    135   5e-30
sp|P29757.4|CYB_SOLTU RecName: Full=Cytochrome b; AltName: Full=...   135   5e-30
dbj|BAD83429.2| apocytochrome b (mitochondrion) [Nicotiana tabacum]   135   5e-30
sp|P09843.4|CYB_OENBE RecName: Full=Cytochrome b; AltName: Full=...   135   5e-30

>gb|AAU25941.1| cytochrome b [Vitis vinifera]
          Length = 393

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/74 (87%), Positives = 65/74 (87%)
 Frame = +1

Query: 1   RSSSFRPIYQGIFWXXXXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 180
           RSSSFRPIYQGIFW         GWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG
Sbjct: 320 RSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 379

Query: 181 RGIPNSYTDETDHT 222
           RGIPNSYTDETDHT
Sbjct: 380 RGIPNSYTDETDHT 393


>gb|AAB51379.1| apocytochrome b [Nicotiana tabacum]
          Length = 393

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/74 (86%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   RSSSFRPIYQGIFWXXXXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 180
           RSSSFRPIYQGIFW         GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVG
Sbjct: 320 RSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITPILGRVG 379

Query: 181 RGIPNSYTDETDHT 222
           RGIPNSYTDETDHT
Sbjct: 380 RGIPNSYTDETDHT 393


>sp|P29757.4|CYB_SOLTU RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3;
           AltName: Full=Complex III subunit III; AltName:
           Full=Cytochrome b-c1 complex subunit 3; AltName:
           Full=Ubiquinol-cytochrome-c reductase complex cytochrome
           b subunit
          Length = 393

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/74 (86%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   RSSSFRPIYQGIFWXXXXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 180
           RSSSFRPIYQGIFW         GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVG
Sbjct: 320 RSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITPILGRVG 379

Query: 181 RGIPNSYTDETDHT 222
           RGIPNSYTDETDHT
Sbjct: 380 RGIPNSYTDETDHT 393


>dbj|BAD83429.2| apocytochrome b (mitochondrion) [Nicotiana tabacum]
          Length = 393

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/74 (86%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   RSSSFRPIYQGIFWXXXXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 180
           RSSSFRPIYQGIFW         GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVG
Sbjct: 320 RSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITPILGRVG 379

Query: 181 RGIPNSYTDETDHT 222
           RGIPNSYTDETDHT
Sbjct: 380 RGIPNSYTDETDHT 393


>sp|P09843.4|CYB_OENBE RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3;
           AltName: Full=Complex III subunit III; AltName:
           Full=Cytochrome b-c1 complex subunit 3; AltName:
           Full=Ubiquinol-cytochrome-c reductase complex cytochrome
           b subunit
          Length = 394

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/74 (86%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   RSSSFRPIYQGIFWXXXXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG 180
           RSSSFRPIYQGIFW         GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVG
Sbjct: 321 RSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSIVFFLFFAITPILGRVG 380

Query: 181 RGIPNSYTDETDHT 222
           RGIPNSYTDETDHT
Sbjct: 381 RGIPNSYTDETDHT 394