BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041062
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   167   8e-40
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   158   5e-37

>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/120 (65%), Positives = 96/120 (80%)
 Frame = +1

Query: 1   VDHWNXXXXXXXXXXXXEMAIDLFMEMERLSVKPDDITFIGVLSACDHSGMVEEGCMFFE 180
           +DHWN            E+A +LFMEME+L VKPDDITFIGVL+AC+H+G+V+EG M FE
Sbjct: 417 IDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFE 476

Query: 181 LMRRAHCMKPKLQHYGCMVDILARAGYLEDAMKLIASMPIEPNDVVWRALLSACKNHDNY 360
           LMRR H ++PKLQHYGCMVDIL RAG++E+A K +  MPIEPNDVVWR LLSAC+NH+N+
Sbjct: 477 LMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENF 536


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/120 (62%), Positives = 94/120 (78%)
 Frame = +1

Query: 1   VDHWNXXXXXXXXXXXXEMAIDLFMEMERLSVKPDDITFIGVLSACDHSGMVEEGCMFFE 180
           +DHWN            E+A +LFMEME+L VKP+DITFIGVL+AC+H+G+V+EG M F 
Sbjct: 463 IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFX 522

Query: 181 LMRRAHCMKPKLQHYGCMVDILARAGYLEDAMKLIASMPIEPNDVVWRALLSACKNHDNY 360
           LMR  H ++PKLQHYGCMVDIL RAG++E+  K +  MPIEPNDVVWR LLSAC+NH+N+
Sbjct: 523 LMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLSACRNHENF 582


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/120 (60%), Positives = 91/120 (75%)
 Frame = +1

Query: 1   VDHWNXXXXXXXXXXXXEMAIDLFMEMERLSVKPDDITFIGVLSACDHSGMVEEGCMFFE 180
           VDHWN            E+A D  MEMER+ V+PDDITFIG+L+AC H+G+V+EG M FE
Sbjct: 422 VDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFE 481

Query: 181 LMRRAHCMKPKLQHYGCMVDILARAGYLEDAMKLIASMPIEPNDVVWRALLSACKNHDNY 360
           LMRR H ++PKLQHYGCMVDIL RAG++E+A   +  MP EPNDV+WR+LLSACK H+++
Sbjct: 482 LMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESF 541


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/120 (58%), Positives = 91/120 (75%)
 Frame = +1

Query: 1   VDHWNXXXXXXXXXXXXEMAIDLFMEMERLSVKPDDITFIGVLSACDHSGMVEEGCMFFE 180
           +DHWN            ++A  + +EM RLSVKPD ITFIGVL+AC H+G+V+EG + FE
Sbjct: 420 IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFE 479

Query: 181 LMRRAHCMKPKLQHYGCMVDILARAGYLEDAMKLIASMPIEPNDVVWRALLSACKNHDNY 360
           LMR+ H ++PKLQHYGCMVDIL +AG +E A+K I  MPIEPND++WR LLSAC+NH+N+
Sbjct: 480 LMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENF 539


>ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g45350, chloroplastic-like [Vitis vinifera]
          Length = 704

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/120 (59%), Positives = 92/120 (76%)
 Frame = +1

Query: 1   VDHWNXXXXXXXXXXXXEMAIDLFMEMERLSVKPDDITFIGVLSACDHSGMVEEGCMFFE 180
           +DHWN            E+A +LFMEME+L VKP+DITFIGVL+AC+H+G+V+EG M FE
Sbjct: 410 IDHWNAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFE 469

Query: 181 LMRRAHCMKPKLQHYGCMVDILARAGYLEDAMKLIASMPIEPNDVVWRALLSACKNHDNY 360
           LM+R   ++PKLQHY CMVDIL +AG++E+  K +  M IEPNDVVWR LLSAC+NH+N+
Sbjct: 470 LMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSIEPNDVVWRTLLSACRNHENF 529