BLASTX nr result

ID: Coptis21_contig00041052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041052
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...    58   7e-07
emb|CBI26957.3| unnamed protein product [Vitis vinifera]               58   7e-07

>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/88 (45%), Positives = 53/88 (60%)
 Frame = +3

Query: 3   EAENLRQENSNLRNANKDLMKRLTVLAQVSFRNRYLSSGVGFPSLSIVNDFRNLCIGDSG 182
           EAE LR ENSNLR AN+DL KRL++L Q S +NR+++S     S S+ ++FR L +GD  
Sbjct: 157 EAEVLRHENSNLRIANRDLNKRLSLLIQNSIQNRFVNSEYS-SSRSMADEFRRLGLGD-- 213

Query: 183 DNGGRYNGGNHVIGADVVSSPTSVIIDD 266
             G      +  I  +   SPTSVI  D
Sbjct: 214 --GNETRSWDDEISNE---SPTSVIESD 236


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/88 (45%), Positives = 53/88 (60%)
 Frame = +3

Query: 3   EAENLRQENSNLRNANKDLMKRLTVLAQVSFRNRYLSSGVGFPSLSIVNDFRNLCIGDSG 182
           EAE LR ENSNLR AN+DL KRL++L Q S +NR+++S     S S+ ++FR L +GD  
Sbjct: 159 EAEVLRHENSNLRIANRDLNKRLSLLIQNSIQNRFVNSEYS-SSRSMADEFRRLGLGD-- 215

Query: 183 DNGGRYNGGNHVIGADVVSSPTSVIIDD 266
             G      +  I  +   SPTSVI  D
Sbjct: 216 --GNETRSWDDEISNE---SPTSVIESD 238


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