BLASTX nr result

ID: Coptis21_contig00041038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041038
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   100   1e-19
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              100   1e-19
gb|ABK94444.1| unknown [Populus trichocarpa]                           97   1e-18
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213...    89   3e-16

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
 Frame = +2

Query: 5   NRNKEAEGLEGITQMNNLHADDDLIVRNEGVAPVDDVPLQHGFSDSEDNYDRTHEVDSEL 184
           +R+   E +E I  +N+  A  D  +  E ++ V +   Q    D EDN      ++SE+
Sbjct: 282 HRDGTLEDVEEIRDLNHSLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEI 335

Query: 185 QKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRR 334
           +   R+    P S  LSCVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR
Sbjct: 336 KDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRR 389


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
 Frame = +2

Query: 5   NRNKEAEGLEGITQMNNLHADDDLIVRNEGVAPVDDVPLQHGFSDSEDNYDRTHEVDSEL 184
           +R+   E +E I  +N+  A  D  +  E ++ V +   Q    D EDN      ++SE+
Sbjct: 254 HRDGTLEDVEEIRDLNHSLASKDSKLHGEKLSTVPERTSQDEGFDIEDN------INSEI 307

Query: 185 QKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRR 334
           +   R+    P S  LSCVICW E+S TRGVLPCGHRFCY+CIQ+WADHMASRR
Sbjct: 308 KDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASRR 361


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = +2

Query: 5   NRNKEAEGLEGI---TQMNNLHADDDLIVRNEGVAPVDDVPLQHGFSDSEDNYDRTHEVD 175
           NR    E L+ I   T  N+L   +      EG     ++    G S +E+   +  ++D
Sbjct: 258 NRGSAVESLDEIEEGTHWNHLPVSEYSNSFPEGALTASEIADSSG-SAAENLNAKVKDMD 316

Query: 176 SELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMAS 343
            + +   R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR  S
Sbjct: 317 -QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRIS 371


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +2

Query: 179 ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMAS 343
           + +   R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR  S
Sbjct: 257 QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRIS 311


>ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213123 [Cucumis sativus]
          Length = 490

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/109 (45%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
 Frame = +2

Query: 23  EGLEGITQMNNLHADDDLIVRNEG-VAPVDDVPLQHGFSDSEDNY-DRTHEVDSELQKTT 196
           EG+E     +    D +L+V N   V  +      H  +D + N  D   E+D+ L  T 
Sbjct: 299 EGVEACENQST-SKDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDASLPST- 356

Query: 197 RVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMAS 343
               S  LSCVICW ++S TRGVLPCGHRFCY+CIQNWADHMA  R  S
Sbjct: 357 ----STELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKIS 401


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