BLASTX nr result

ID: Coptis21_contig00041033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041033
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44060.1| unknown [Lotus japonicus]                               65   6e-09
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...    65   6e-09
ref|XP_002893063.1| jacalin lectin family protein [Arabidopsis l...    65   6e-09
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    64   1e-08
ref|NP_001117315.1| mannose-binding lectin-like protein [Arabido...    64   2e-08

>gb|AFK44060.1| unknown [Lotus japonicus]
          Length = 158

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 227 KPFDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDICNRV 69
           +P+DDG +SGIKQIY+      + S+ IEYDRN  SVWS KHGG GG+I +R+
Sbjct: 8   RPWDDGVFSGIKQIYLTKAPEGICSIQIEYDRNKQSVWSVKHGGNGGNILHRI 60


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
            ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = -2

Query: 221  FDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDI 81
            +DDG +SGIKQI+V  GN+V+ S+ +EYDRNG SVWS KHGG    +
Sbjct: 1340 WDDGVFSGIKQIFVTRGNDVISSIQVEYDRNGQSVWSTKHGGDNNGV 1386


>ref|XP_002893063.1| jacalin lectin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338905|gb|EFH69322.1| jacalin lectin family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = -2

Query: 221 FDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDI 81
           +DDG +SGIKQI+V  GN+V+ S+ +EYDRNG SVWS KHGG    +
Sbjct: 446 WDDGVFSGIKQIFVTRGNDVISSIQVEYDRNGQSVWSTKHGGDNNGV 492


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/53 (58%), Positives = 38/53 (71%)
 Frame = -2

Query: 227  KPFDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDICNRV 69
            +P+DDG +SGIKQI+V     +  S+ IEYDRNG SVWS +HGG GG   NRV
Sbjct: 1070 RPWDDGVFSGIKQIFVTRAEAIC-SIQIEYDRNGQSVWSVRHGGSGGTATNRV 1121



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = -2

Query: 221  FDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDICNRVSQFHLLYIL 42
            FDDGT +GI+QIY+     +V S+ ++YDRNG +VW  KHGG GG    +++  +   IL
Sbjct: 876  FDDGTNTGIRQIYLSRSIGIV-SIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYPYEIL 934

Query: 41   L*KQGTF 21
                GT+
Sbjct: 935  THISGTY 941


>ref|NP_001117315.1| mannose-binding lectin-like protein [Arabidopsis thaliana]
           gi|10086506|gb|AAG12566.1|AC007797_26 Unknown protein
           [Arabidopsis thaliana] gi|332191768|gb|AEE29889.1|
           mannose-binding lectin-like protein [Arabidopsis
           thaliana]
          Length = 571

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = -2

Query: 221 FDDGTYSGIKQIYVHIGNNVVHSMLIEYDRNGCSVWSQKHGGPGGDICNRVSQF 60
           +DDG +SGIKQI+V  GN+ + S+ IEYDRNG SVWS KHGG    +     +F
Sbjct: 422 WDDGVFSGIKQIFVTRGNDAITSIQIEYDRNGQSVWSIKHGGDSNGVATHRIKF 475


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