BLASTX nr result

ID: Coptis21_contig00041011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00041011
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   149   3e-34
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002268837.2| PREDICTED: glutamate receptor 2.7-like, part...   147   9e-34
emb|CBI23973.3| unnamed protein product [Vitis vinifera]              147   9e-34
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   147   1e-33

>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  149 bits (375), Expect = 3e-34
 Identities = 79/137 (57%), Positives = 90/137 (65%), Gaps = 20/137 (14%)
 Frame = +3

Query: 3   GFWIPKVGI------------------PHLRPILWPGEVMDMPNGSVIPT--KKLKIGVP 122
           GFW PK GI                   +L  I+WPGE    P G V+P   KKLKIGVP
Sbjct: 409 GFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKLKIGVP 468

Query: 123 VKHSFTEFVKVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYT 302
           VK  F+EFVKV  + + N TKVTGYCIDVFDAVM  LPY VPYEY+PF  P+G  AGNY 
Sbjct: 469 VKDGFSEFVKVTWDPNTNATKVTGYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKPAGNYN 528

Query: 303 NLIHQVFLQKYDAVVGD 353
           +LI+QVFL+KYDAVVGD
Sbjct: 529 DLIYQVFLKKYDAVVGD 545


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  149 bits (375), Expect = 3e-34
 Identities = 79/137 (57%), Positives = 90/137 (65%), Gaps = 20/137 (14%)
 Frame = +3

Query: 3   GFWIPKVGI------------------PHLRPILWPGEVMDMPNGSVIPT--KKLKIGVP 122
           GFW PK GI                   +L  I+WPGE    P G V+P   KKLKIGVP
Sbjct: 409 GFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKLKIGVP 468

Query: 123 VKHSFTEFVKVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYT 302
           VK  F+EFVKV  + + N TKVTGYCIDVFDAVM  LPY VPYEY+PF  P+G  AGNY 
Sbjct: 469 VKDGFSEFVKVTWDPNTNATKVTGYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKPAGNYN 528

Query: 303 NLIHQVFLQKYDAVVGD 353
           +LI+QVFL+KYDAVVGD
Sbjct: 529 DLIYQVFLKKYDAVVGD 545


>ref|XP_002268837.2| PREDICTED: glutamate receptor 2.7-like, partial [Vitis vinifera]
          Length = 953

 Score =  147 bits (371), Expect = 9e-34
 Identities = 77/128 (60%), Positives = 87/128 (67%), Gaps = 11/128 (8%)
 Frame = +3

Query: 3   GFWIPKVGIP---------HLRPILWPGEVMDMPNGSVIPT--KKLKIGVPVKHSFTEFV 149
           GFW  + GI          +LR I WPGE   +P G V+PT  KKLKIGVPVK  F+EFV
Sbjct: 388 GFWTQENGIVRRPNSTSKVNLRAITWPGESTSVPKGWVLPTNGKKLKIGVPVKEGFSEFV 447

Query: 150 KVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYTNLIHQVFLQ 329
           KV  +   N TKVTGYCI +FDAVM  LPY VPYEYVPF  P+G+ AGNY  LI QV+ Q
Sbjct: 448 KVMRDPITNTTKVTGYCIAIFDAVMATLPYAVPYEYVPFETPDGNAAGNYDELISQVYFQ 507

Query: 330 KYDAVVGD 353
           KYDAVVGD
Sbjct: 508 KYDAVVGD 515


>emb|CBI23973.3| unnamed protein product [Vitis vinifera]
          Length = 1842

 Score =  147 bits (371), Expect = 9e-34
 Identities = 77/128 (60%), Positives = 87/128 (67%), Gaps = 11/128 (8%)
 Frame = +3

Query: 3   GFWIPKVGIP---------HLRPILWPGEVMDMPNGSVIPT--KKLKIGVPVKHSFTEFV 149
           GFW  + GI          +LR I WPGE   +P G V+PT  KKLKIGVPVK  F+EFV
Sbjct: 301 GFWTQENGIVRRPNSTSKVNLRAITWPGESTSVPKGWVLPTNGKKLKIGVPVKEGFSEFV 360

Query: 150 KVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYTNLIHQVFLQ 329
           KV  +   N TKVTGYCI +FDAVM  LPY VPYEYVPF  P+G+ AGNY  LI QV+ Q
Sbjct: 361 KVMRDPITNTTKVTGYCIAIFDAVMATLPYAVPYEYVPFETPDGNAAGNYDELISQVYFQ 420

Query: 330 KYDAVVGD 353
           KYDAVVGD
Sbjct: 421 KYDAVVGD 428



 Score =  137 bits (345), Expect = 9e-31
 Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 11/129 (8%)
 Frame = +3

Query: 3    GFWIPKVGI---------PHLRPILWPGEVMDMPNGSVIPT--KKLKIGVPVKHSFTEFV 149
            GFW P+ G          P+L  I+WPGE   +P G V+PT  KKL+IGVPV   F EFV
Sbjct: 1249 GFWTPENGTVRKLDSTSKPNLGTIVWPGESPSIPKGWVLPTNGKKLRIGVPVTKGFGEFV 1308

Query: 150  KVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYTNLIHQVFLQ 329
            KV  + S+N TKV+G+ I VFDAVM  LPY VPYEY+PF+ P+G+ AG+  +LI+QV+LQ
Sbjct: 1309 KVTRDPSSNATKVSGFSIAVFDAVMAALPYAVPYEYIPFQTPDGNPAGDDNDLIYQVYLQ 1368

Query: 330  KYDAVVGDV 356
            KYDAVVG +
Sbjct: 1369 KYDAVVGAI 1377


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  147 bits (370), Expect = 1e-33
 Identities = 77/137 (56%), Positives = 89/137 (64%), Gaps = 20/137 (14%)
 Frame = +3

Query: 3   GFWIPKVGI------------------PHLRPILWPGEVMDMPNGSVIPT--KKLKIGVP 122
           GFW PK GI                   +L  I+WPGE    P G V+P   KKLKIGVP
Sbjct: 409 GFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKLKIGVP 468

Query: 123 VKHSFTEFVKVEVNLSNNGTKVTGYCIDVFDAVMKLLPYVVPYEYVPFRKPNGDRAGNYT 302
           VK  F+EFVKV  + + N TKV GYCIDVFDAVM  LPY VPYEY+PF  P+G  AGNY 
Sbjct: 469 VKDGFSEFVKVTWDPNTNATKVAGYCIDVFDAVMSSLPYAVPYEYIPFGTPDGKPAGNYN 528

Query: 303 NLIHQVFLQKYDAVVGD 353
           +L++QVFL+KYDAVVGD
Sbjct: 529 DLLYQVFLKKYDAVVGD 545


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