BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040993
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF45873.1| reverse transcriptase [Eleocharis palustris]           128   5e-28
gb|ADF45857.1| reverse transcriptase [Eleocharis macrostachya]        128   5e-28
gb|ADF45950.1| reverse transcriptase [Eleocharis palustris subsp...   126   2e-27
gb|ADF45775.1| reverse transcriptase [Eleocharis mamillata subsp...   126   2e-27
gb|ADF45858.1| reverse transcriptase [Eleocharis macrostachya]        125   5e-27

>gb|ADF45873.1| reverse transcriptase [Eleocharis palustris]
          Length = 87

 Score =  128 bits (321), Expect = 5e-28
 Identities = 55/80 (68%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  TAFLNGELKEEIYMAQPIGFEVQGQEHKVCRLKRSIYGLKQSSRQWHLRFHNSITSISFE 218
           TAFL+GEL+EEIYM QP+GF V+G+EHKVC+L+RSIYGLKQ+SRQW+L+FH +I S  F+
Sbjct: 1   TAFLHGELQEEIYMVQPVGFVVKGKEHKVCKLRRSIYGLKQASRQWYLKFHQAIISNGFQ 60

Query: 219 MIEEDHCVYTKRSRKSFLIL 278
           MIEEDHCVY KRS+ +F+++
Sbjct: 61  MIEEDHCVYIKRSKNNFIVI 80


>gb|ADF45857.1| reverse transcriptase [Eleocharis macrostachya]
          Length = 88

 Score =  128 bits (321), Expect = 5e-28
 Identities = 55/80 (68%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  TAFLNGELKEEIYMAQPIGFEVQGQEHKVCRLKRSIYGLKQSSRQWHLRFHNSITSISFE 218
           TAFL+GEL+EEIYM QP+GF V+G+EHKVC+L+RSIYGLKQ+SRQW+L+FH +I S  F+
Sbjct: 1   TAFLHGELQEEIYMVQPVGFVVKGKEHKVCKLRRSIYGLKQASRQWYLKFHQAIISNGFQ 60

Query: 219 MIEEDHCVYTKRSRKSFLIL 278
           MIEEDHCVY KRS+ +F+++
Sbjct: 61  MIEEDHCVYIKRSKNNFIVI 80


>gb|ADF45950.1| reverse transcriptase [Eleocharis palustris subsp. waltersii]
          Length = 88

 Score =  126 bits (317), Expect = 2e-27
 Identities = 55/80 (68%), Positives = 71/80 (88%)
 Frame = +3

Query: 39  TAFLNGELKEEIYMAQPIGFEVQGQEHKVCRLKRSIYGLKQSSRQWHLRFHNSITSISFE 218
           TAFL+GEL+EEIYM QP+GF V+G+EHKVC+L RSIYGLKQ+SRQW+L+FH +I S  F+
Sbjct: 1   TAFLHGELQEEIYMVQPVGFVVKGKEHKVCKLLRSIYGLKQASRQWYLKFHQAILSNGFQ 60

Query: 219 MIEEDHCVYTKRSRKSFLIL 278
           MIEEDHCVY KRS+ +F+++
Sbjct: 61  MIEEDHCVYIKRSKNNFIVI 80


>gb|ADF45775.1| reverse transcriptase [Eleocharis mamillata subsp. austriaca]
          Length = 88

 Score =  126 bits (317), Expect = 2e-27
 Identities = 54/80 (67%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  TAFLNGELKEEIYMAQPIGFEVQGQEHKVCRLKRSIYGLKQSSRQWHLRFHNSITSISFE 218
           TAFL+GEL+EEIYM QP+GF V+G+EHKVC+L+RSIYGLKQ+SRQW+L+FH +I S  F+
Sbjct: 1   TAFLHGELQEEIYMVQPVGFVVKGKEHKVCKLRRSIYGLKQTSRQWYLKFHQAIISNGFQ 60

Query: 219 MIEEDHCVYTKRSRKSFLIL 278
           MIEEDHCVY K+S+ +F+++
Sbjct: 61  MIEEDHCVYIKKSKNNFIVV 80


>gb|ADF45858.1| reverse transcriptase [Eleocharis macrostachya]
          Length = 88

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +3

Query: 39  TAFLNGELKEEIYMAQPIGFEVQGQEHKVCRLKRSIYGLKQSSRQWHLRFHNSITSISFE 218
           TAF +GEL+EEIYM QP+GF V+G+EHKVC+L RSIYGLKQ+SRQW+L+FH +I S  F+
Sbjct: 1   TAFFHGELQEEIYMVQPVGFVVKGKEHKVCKLLRSIYGLKQASRQWYLKFHQAILSNGFQ 60

Query: 219 MIEEDHCVYTKRSRKSFLIL 278
           MIEEDHCVY KRS+ +F+++
Sbjct: 61  MIEEDHCVYIKRSKNNFIVI 80