BLASTX nr result

ID: Coptis21_contig00040976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040976
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511418.1| DNA binding protein, putative [Ricinus commu...   116   2e-24
ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253...   101   6e-20
ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811...   101   7e-20

>ref|XP_002511418.1| DNA binding protein, putative [Ricinus communis]
           gi|223550533|gb|EEF52020.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 173

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
 Frame = -1

Query: 315 HHNFSKDTLSQQDRLDHAEVYIKELRERVEMLKRKKQRMMRS----TRNEYGTKSVTVGV 148
           H   SKDTLSQQD+LDHA  YIK L+ER+E LK+ K++ MRS    + N     + T+G 
Sbjct: 40  HLKHSKDTLSQQDQLDHAAAYIKHLKERIEKLKKMKEQAMRSLATNSTNNNALDATTMGS 99

Query: 147 TLPVLELRETDSTLEVILVSSLDKNFIFYQVIGVLEEEGADVVNASFS 4
            LP++ELR+  S++EVIL+S L KNF+ Y+VI ++EEEGA+VV+ASFS
Sbjct: 100 RLPMIELRDLGSSIEVILISGLKKNFMLYEVITIVEEEGAEVVSASFS 147


>ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|222869157|gb|EEF06288.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/107 (54%), Positives = 83/107 (77%), Gaps = 3/107 (2%)
 Frame = -1

Query: 315 HHNF--SKDTLSQQDRLDHAEVYIKELRERVEMLKRKKQRMMRSTR-NEYGTKSVTVGVT 145
           HH F  SKD LSQQD+L+ A  YIK++RERVE LKR K++ + + + +  G  S+ +G+ 
Sbjct: 37  HHFFKPSKDMLSQQDQLELAACYIKQMRERVEKLKRVKEQAITTIQTSRSGMTSMMIGLR 96

Query: 144 LPVLELRETDSTLEVILVSSLDKNFIFYQVIGVLEEEGADVVNASFS 4
           LPV+ELR+  S++EV+LVS L+KNF+FY+VI VL +EGA+VV+AS+S
Sbjct: 97  LPVIELRDFGSSIEVVLVSGLNKNFMFYEVITVLSDEGAEVVSASYS 143


>ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|222859319|gb|EEE96866.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/102 (55%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
 Frame = -1

Query: 303 SKDTLSQQDRLDHAEVYIKELRERVEMLKR-KKQRMMRSTRNEYGTK-SVTVGVTLPVLE 130
           SKD LSQQD+L+ A  YIK+LRERVE LKR K+++ + +TR     K S+ +G+ LPV+E
Sbjct: 43  SKDMLSQQDQLELAACYIKQLRERVEGLKRVKEEQAITTTRTSSSAKTSMMIGLRLPVVE 102

Query: 129 LRETDSTLEVILVSSLDKNFIFYQVIGVLEEEGADVVNASFS 4
           LR+  ST+EV+L+S L+KNF+FY+VI VL +EGA+V++AS+S
Sbjct: 103 LRDFGSTIEVVLISGLNKNFMFYEVINVLSDEGAEVISASYS 144


>ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253569 [Vitis vinifera]
           gi|297733800|emb|CBI15047.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/101 (53%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
 Frame = -1

Query: 303 SKDTLSQQDRLDHAEVYIKELRERVEMLKRKKQRMMR-STRNEYGTKSVTVGVTLPVLEL 127
           SKD LSQQD+L+ A  YIK+L+ER+E LK +K+   R +  N     +V +G+ LPV++L
Sbjct: 43  SKDMLSQQDQLEQAANYIKQLKERIEELKGRKELATRVAGTNNNLIDAVMIGLRLPVIDL 102

Query: 126 RETDSTLEVILVSSLDKNFIFYQVIGVLEEEGADVVNASFS 4
           R+  S+LEV+L+S L+KNF+ Y+VI VLEEEGA+VV+AS S
Sbjct: 103 RDLGSSLEVMLISGLNKNFMLYEVISVLEEEGAEVVSASVS 143


>ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811485 [Glycine max]
          Length = 191

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/102 (50%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
 Frame = -1

Query: 303 SKDTLSQQDRLDHAEVYIKELRERVEMLKRKKQRMMRS--TRNEYGTKSVTVGVTLPVLE 130
           +KD LSQQD+LD A  YIK L+ER+E LK +K+++M    + N+       +G  LP+LE
Sbjct: 46  TKDMLSQQDQLDLATTYIKRLKERIEKLKGEKEKIMNMMMSSNQNNNSIFNIGSQLPLLE 105

Query: 129 LRETDSTLEVILVSSLDKNFIFYQVIGVLEEEGADVVNASFS 4
           +++  S +EV+L+S L+KNF+ Y+VI VLEEEGA+VV A+FS
Sbjct: 106 IKDLGSGIEVMLISGLNKNFMLYEVISVLEEEGAEVVTANFS 147


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