BLASTX nr result

ID: Coptis21_contig00040965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040965
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc...   157   7e-37
ref|XP_002447084.1| hypothetical protein SORBIDRAFT_06g028280 [S...   156   1e-36
gb|EEC77983.1| hypothetical protein OsI_17366 [Oryza sativa Indi...   155   4e-36
gb|EEE61669.1| hypothetical protein OsJ_16135 [Oryza sativa Japo...   154   6e-36
ref|NP_001053852.1| Os04g0613200 [Oryza sativa Japonica Group] g...   154   6e-36

>ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max]
          Length = 472

 Score =  157 bits (398), Expect = 7e-37
 Identities = 74/123 (60%), Positives = 100/123 (81%)
 Frame = -2

Query: 372 ADPTGRTDSTDALLRVISDAFKTSSNRNLMQGINDLGGAEVHLEGGSYMISRPLQLPASG 193
           ADPTG +DST+ALL  I DA K  S   LM+GI DLGGA+++LEGG+Y+ISR L+LP +G
Sbjct: 70  ADPTGNSDSTEALLAAIEDAAKGPSEGYLMEGIRDLGGAQINLEGGNYLISRSLKLPVAG 129

Query: 192 GGNLVIHGGSLRASNDFAADRYLIELSATSDGNKALPQYTYEYITLRDLMLDPNYRGGGI 13
            GNL+IHGG++RAS++F  D Y+I+LS +S+G  +LP Y +E+ITL++L+LD N+RGGGI
Sbjct: 130 VGNLMIHGGTIRASDNFPEDGYIIDLSPSSNGRNSLPSYNFEFITLKELLLDSNFRGGGI 189

Query: 12  SVI 4
           SVI
Sbjct: 190 SVI 192


>ref|XP_002447084.1| hypothetical protein SORBIDRAFT_06g028280 [Sorghum bicolor]
           gi|241938267|gb|EES11412.1| hypothetical protein
           SORBIDRAFT_06g028280 [Sorghum bicolor]
          Length = 496

 Score =  156 bits (395), Expect = 1e-36
 Identities = 78/123 (63%), Positives = 92/123 (74%)
 Frame = -2

Query: 372 ADPTGRTDSTDALLRVISDAFKTSSNRNLMQGINDLGGAEVHLEGGSYMISRPLQLPASG 193
           ADPTG TD+T A+ + I+DAF   +N  +  GI DLGGAEVHL+GG+Y+I  PL LPASG
Sbjct: 103 ADPTGATDATAAINKAIADAFSPPNNATMTGGIPDLGGAEVHLDGGTYLIKGPLTLPASG 162

Query: 192 GGNLVIHGGSLRASNDFAADRYLIELSATSDGNKALPQYTYEYITLRDLMLDPNYRGGGI 13
           GGN  IH GSLRAS+DF  DRYLIELSAT  G      Y YEY TLRDLMLD +YRGGG+
Sbjct: 163 GGNFKIHSGSLRASDDFPTDRYLIELSATKSGR----SYDYEYATLRDLMLDCSYRGGGV 218

Query: 12  SVI 4
           +V+
Sbjct: 219 TVV 221


>gb|EEC77983.1| hypothetical protein OsI_17366 [Oryza sativa Indica Group]
          Length = 493

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = -2

Query: 372 ADPTGRTDSTDALLRVISDAFKTSSNRNLMQGINDLGGAEVHLEGGSYMISRPLQLPASG 193
           ADPTG  D+T A+   I+DAF+  SN  +  GI DLGGAE+HL+GGSY++  PL LPASG
Sbjct: 92  ADPTGGADATAAINSAIADAFRRPSNATMTGGIPDLGGAEIHLDGGSYLLKGPLSLPASG 151

Query: 192 GGNLVIHGGSLRASNDFAADRYLIELSATS----DGNKALPQYTYEYITLRDLMLDPNYR 25
           GGNL IH GSLRA++DF  DRYLIELSA +     G+     Y YEY+TLRDLMLD NYR
Sbjct: 152 GGNLKIHSGSLRAADDFPTDRYLIELSAKAAGGGGGSSPAMSYYYEYVTLRDLMLDCNYR 211

Query: 24  GGGISVI 4
           GGG+ V+
Sbjct: 212 GGGVQVV 218


>gb|EEE61669.1| hypothetical protein OsJ_16135 [Oryza sativa Japonica Group]
          Length = 463

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = -2

Query: 372 ADPTGRTDSTDALLRVISDAFKTSSNRNLMQGINDLGGAEVHLEGGSYMISRPLQLPASG 193
           ADPTG  D+T A+   I+DAF+  SN  +  GI DLGGAE+HL+GGSY++  PL LPASG
Sbjct: 96  ADPTGGADATAAINSAIADAFRRPSNATMTGGIPDLGGAEIHLDGGSYLLKGPLSLPASG 155

Query: 192 GGNLVIHGGSLRASNDFAADRYLIELSATS----DGNKALPQYTYEYITLRDLMLDPNYR 25
           GGNL IH GSLRA++DF  DRYLIELSA +     G+     Y YEY+TLRDLMLD NYR
Sbjct: 156 GGNLKIHSGSLRAADDFPTDRYLIELSAKAAGGGGGSSPAMSYYYEYVTLRDLMLDCNYR 215

Query: 24  GGGISVI 4
           GGG+ V+
Sbjct: 216 GGGVRVV 222


>ref|NP_001053852.1| Os04g0613200 [Oryza sativa Japonica Group]
           gi|113565423|dbj|BAF15766.1| Os04g0613200 [Oryza sativa
           Japonica Group] gi|215766463|dbj|BAG98771.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 500

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = -2

Query: 372 ADPTGRTDSTDALLRVISDAFKTSSNRNLMQGINDLGGAEVHLEGGSYMISRPLQLPASG 193
           ADPTG  D+T A+   I+DAF+  SN  +  GI DLGGAE+HL+GGSY++  PL LPASG
Sbjct: 99  ADPTGGADATAAINSAIADAFRRPSNATMTGGIPDLGGAEIHLDGGSYLLKGPLSLPASG 158

Query: 192 GGNLVIHGGSLRASNDFAADRYLIELSATS----DGNKALPQYTYEYITLRDLMLDPNYR 25
           GGNL IH GSLRA++DF  DRYLIELSA +     G+     Y YEY+TLRDLMLD NYR
Sbjct: 159 GGNLKIHSGSLRAADDFPTDRYLIELSAKAAGGGGGSSPAMSYYYEYVTLRDLMLDCNYR 218

Query: 24  GGGISVI 4
           GGG+ V+
Sbjct: 219 GGGVRVV 225


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