BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040962
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19

>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = -2

Query: 285 KCGRIDTSVQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRTDGFRVDQFSLT 106
           KCG +D+ +QLF+EM  RD+ASWNTVIS +VKE+ YERAF  FRDM R DGFR+D F+L+
Sbjct: 218 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 277

Query: 105 NLLVASTEGFNYLKGRECHAHALKNGFGSNLSVNN 1
            +LVA+  G   + GRE HAH +K GF SN+SV N
Sbjct: 278 TILVAA-RGLASMVGREIHAHVIKIGFESNISVIN 311


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = -2

Query: 285 KCGRIDTSVQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRTDGFRVDQFSLT 106
           KCG +D+ +QLF+EM  RD+ASWNTVIS +VKE+ YERAF  FRDM R DGFR+D F+L+
Sbjct: 236 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 295

Query: 105 NLLVASTEGFNYLKGRECHAHALKNGFGSNLSVNN 1
            +LVA+  G   + GRE HAH +K GF SN+SV N
Sbjct: 296 TILVAA-RGLASMVGREIHAHVIKIGFESNISVIN 329


>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/95 (49%), Positives = 67/95 (70%)
 Frame = -2

Query: 285 KCGRIDTSVQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRTDGFRVDQFSLT 106
           KCG +D ++ LF+EM +RD+ASWNT+IS LVK L YE+A   FR + +  GF+ DQF+L+
Sbjct: 250 KCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLS 309

Query: 105 NLLVASTEGFNYLKGRECHAHALKNGFGSNLSVNN 1
            LL A       ++GRE HA+A++ G  +NLSV+N
Sbjct: 310 TLLTACARCHARIQGREIHAYAIRIGLENNLSVSN 344


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = -2

Query: 285 KCGRIDTSVQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRTDGFRVDQFSLT 106
           KCG +D  ++LFEEM +RD+ SWNTVIS LVKE +Y+ AF +FR M    G +VD FSL+
Sbjct: 243 KCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLS 302

Query: 105 NLLVASTEGFNYLKGRECHAHALKNGFGSNLSVNN 1
            LL A       +KG++ HA ALK G  S+LSV++
Sbjct: 303 TLLTACAGSVKPMKGQQLHALALKVGLESHLSVSS 337


>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = -2

Query: 285 KCGRIDTSVQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRTDGFRVDQFSLT 106
           KCG +D  ++LFEEM +RD+ SWNTVIS LVKE +Y+ AF +FR M    G +VD FSL+
Sbjct: 243 KCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLS 302

Query: 105 NLLVASTEGFNYLKGRECHAHALKNGFGSNLSVNN 1
            LL A       +KG++ HA ALK G  S+LSV++
Sbjct: 303 TLLTACAGSVKPMKGQQLHALALKVGLESHLSVSS 337