BLASTX nr result

ID: Coptis21_contig00040944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040944
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...    57   1e-06
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = -2

Query: 303 DQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDELHASK---LSSSFVDEKVDENXXXXX 133
           ++V EEFE++P WLK        +LPWLPI+ DEL++          +DE V +      
Sbjct: 142 ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNSGTHFVCCGDDLDELVVDT--GDG 199

Query: 132 XXXXXXXXXXXXSVYIEIAPIDDEVQRKATCLKTEVVSFESTSK 1
                        V  + AP+D EVQ  A  LK ++++FES+SK
Sbjct: 200 EERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLKAQILTFESSSK 243


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = -2

Query: 303 DQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDELHASK---LSSSFVDEKVDENXXXXX 133
           ++V EEFE++P WLK        +LPWLPI+ DEL++          +DE V +      
Sbjct: 142 ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNSGTHFVCCGDDLDELVVDT--GDG 199

Query: 132 XXXXXXXXXXXXSVYIEIAPIDDEVQRKATCLKTEVVSFESTSK 1
                        V  + AP+D EVQ  A  LK ++++FES+SK
Sbjct: 200 EERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLKAQILTFESSSK 243


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = -2

Query: 303 DQVEEEFESLPSWLK-SLNNAPSSVLPWLPITCDELHASKLSSSFVD-EKVDENXXXXXX 130
           ++V+EEF S+P +LK + ++A    LPWLP++ D L++ +L + +   E           
Sbjct: 136 ERVDEEFGSIPDYLKDAASSANELFLPWLPLSHDTLNSRELFAGYESPEDFLSQVGEGSG 195

Query: 129 XXXXXXXXXXXSVYIEIAPIDDEVQRKATCLKTEVVSFESTSK 1
                         + +AP+D+E+Q  AT LK  +++FES+SK
Sbjct: 196 DNSKDVAEEMEIDLVMVAPLDEEIQNMATSLKERIMTFESSSK 238